RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TPM3P06753 285 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 TNNT1P13805 278 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 GPATCH3Q96I76 525 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 PNPLA6Q8IY17 1366 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 PRDM4Q9UKN5 801 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
PPFIA2-227ENST00000552948 ANXA1P04083 346 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 RHPN1Q8TCX5 695 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 V9GYY5 206 aaPredicted RBP13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 ASXL2Q76L83 1435 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
PPFIA2-227ENST00000552948 RAB11FIP3O75154 756 aa13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 LRMPQ12912 555 aa13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 OSBPL3Q9H4L5 887 aa13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 KIF1BPQ96EK5 621 aa13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
PPFIA2-227ENST00000552948 KIAA1210Q9ULL0 1709 aa13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 ZCCHC11Q5TAX3 1644 aaKnown RBP13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 HSPA4P34932 840 aa13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 ANO6Q4KMQ2 910 aa13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 IL25Q9H293 177 aa13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 TRMT1Q9NXH9 659 aaKnown RBP13.77□□□□□ -0.2
PPFIA2-227ENST00000552948 PPFIA3O75145 1194 aa13.77□□□□□ -0.21
PPFIA2-227ENST00000552948 TAF7Q15545 349 aaPredicted RBP13.77□□□□□ -0.21
PPFIA2-227ENST00000552948 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
PPFIA2-227ENST00000552948 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
PPFIA2-227ENST00000552948 KIF24Q5T7B8 1368 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 ADGRB2O60241 1585 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 GLI2P10070 1586 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 POGZQ7Z3K3 1410 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 TYRO3Q06418 890 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 LARGE1O95461 756 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 DMTNQ08495 405 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 SIL1Q9H173 461 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
PPFIA2-227ENST00000552948 SGSM2O43147 1006 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 ZNF165P49910 485 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 ADGRB3O60242 1522 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 NLRP6P59044 892 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 KIAA1524Q8TCG1 905 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 DNAJC25Q9H1X3 360 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
PPFIA2-227ENST00000552948 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 AACSQ86V21 672 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 USHBP1Q8N6Y0 703 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 SETBP1Q9Y6X0 1596 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 RGS12O14924 1447 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 HTATSF1O43719 755 aaKnown RBP13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 LIG1P18858 919 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 PDCP20941 246 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 GLRX3O76003 335 aaKnown RBP13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 RAD50Q92878 1312 aa13.74□□□□□ -0.21
PPFIA2-227ENST00000552948 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 MROH2AA6NES4 1674 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 ADCK5Q3MIX3 580 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 ACEP12821 1306 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 RNF20Q5VTR2 975 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 BOLA2Q9H3K6 86 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 TEFQ10587 303 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
PPFIA2-227ENST00000552948 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 GNAT3A8MTJ3 354 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 PI4KAP1Q8N8J0 262 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms