RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 MFRPQ9BY79 579 aa12.42□□□□□ -0.42
PRIM1-208ENST00000552590 LY75O60449 1722 aa12.42□□□□□ -0.42
PRIM1-208ENST00000552590 SLIT3O75094 1523 aa12.42□□□□□ -0.42
PRIM1-208ENST00000552590 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
PRIM1-208ENST00000552590 ADGRB1O14514 1584 aa12.41□□□□□ -0.42
PRIM1-208ENST00000552590 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
PRIM1-208ENST00000552590 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
PRIM1-208ENST00000552590 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
PRIM1-208ENST00000552590 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
PRIM1-208ENST00000552590 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
PRIM1-208ENST00000552590 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
PRIM1-208ENST00000552590 PTCD2Q8WV60 388 aaKnown RBP12.4□□□□□ -0.42
PRIM1-208ENST00000552590 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.43
PRIM1-208ENST00000552590 IL2RBP14784 551 aa12.4□□□□□ -0.43
PRIM1-208ENST00000552590 AIDAQ96BJ3 306 aa12.4□□□□□ -0.43
PRIM1-208ENST00000552590 TNRC6CQ9HCJ0 1690 aaKnown RBP12.39□□□□□ -0.43
PRIM1-208ENST00000552590 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
PRIM1-208ENST00000552590 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
PRIM1-208ENST00000552590 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
PRIM1-208ENST00000552590 A0A0G2JLW4 131 aa12.38□□□□□ -0.43
PRIM1-208ENST00000552590 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
PRIM1-208ENST00000552590 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
PRIM1-208ENST00000552590 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
PRIM1-208ENST00000552590 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
PRIM1-208ENST00000552590 FCHSD2O94868 740 aa12.36□□□□□ -0.43
PRIM1-208ENST00000552590 NSD2O96028 1365 aa12.36□□□□□ -0.43
PRIM1-208ENST00000552590 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
PRIM1-208ENST00000552590 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
PRIM1-208ENST00000552590 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
PRIM1-208ENST00000552590 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
PRIM1-208ENST00000552590 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
PRIM1-208ENST00000552590 PHF14O94880 888 aa12.34□□□□□ -0.43
PRIM1-208ENST00000552590 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
PRIM1-208ENST00000552590 C5P01031 1676 aa12.33□□□□□ -0.44
PRIM1-208ENST00000552590 HSPA8P11142 646 aaKnown RBP12.33□□□□□ -0.44
PRIM1-208ENST00000552590 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
PRIM1-208ENST00000552590 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
PRIM1-208ENST00000552590 DPEP1P16444 411 aa12.32□□□□□ -0.44
PRIM1-208ENST00000552590 TGFB2P61812 414 aa12.32□□□□□ -0.44
PRIM1-208ENST00000552590 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
PRIM1-208ENST00000552590 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
PRIM1-208ENST00000552590 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 USP47Q96K76 1375 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
PRIM1-208ENST00000552590 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 WNT2BQ93097 391 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
PRIM1-208ENST00000552590 SBF1O95248 1867 aa12.3□□□□□ -0.44
PRIM1-208ENST00000552590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
PRIM1-208ENST00000552590 VEGFBP49765 207 aa12.3□□□□□ -0.44
PRIM1-208ENST00000552590 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
PRIM1-208ENST00000552590 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
PRIM1-208ENST00000552590 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
PRIM1-208ENST00000552590 MMP10P09238 476 aa12.29□□□□□ -0.44
PRIM1-208ENST00000552590 AK7Q96M32 723 aa12.29□□□□□ -0.44
PRIM1-208ENST00000552590 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
PRIM1-208ENST00000552590 ARFGEF1Q9Y6D6 1849 aa12.28□□□□□ -0.44
PRIM1-208ENST00000552590 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.44
PRIM1-208ENST00000552590 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
PRIM1-208ENST00000552590 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
PRIM1-208ENST00000552590 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
PRIM1-208ENST00000552590 NFAT5O94916 1531 aa12.26□□□□□ -0.45
PRIM1-208ENST00000552590 C4BP0C0L5 1744 aa12.26□□□□□ -0.45
PRIM1-208ENST00000552590 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
PRIM1-208ENST00000552590 TBC1D12O60347 775 aa12.26□□□□□ -0.45
PRIM1-208ENST00000552590 KCNA3P22001 575 aa12.26□□□□□ -0.45
PRIM1-208ENST00000552590 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
PRIM1-208ENST00000552590 POTECB2RU33 542 aa12.25□□□□□ -0.45
PRIM1-208ENST00000552590 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
PRIM1-208ENST00000552590 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
PRIM1-208ENST00000552590 LAPTM4AQ15012 233 aa12.24□□□□□ -0.45
PRIM1-208ENST00000552590 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
PRIM1-208ENST00000552590 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
PRIM1-208ENST00000552590 A0A0C4DFX4 3053 aa12.24□□□□□ -0.45
PRIM1-208ENST00000552590 CUL9Q8IWT3 2517 aa12.24□□□□□ -0.45
PRIM1-208ENST00000552590 SSFA2P28290 1259 aa12.23□□□□□ -0.45
PRIM1-208ENST00000552590 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
PRIM1-208ENST00000552590 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
PRIM1-208ENST00000552590 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
PRIM1-208ENST00000552590 PIM2Q9P1W9 311 aa12.23□□□□□ -0.45
PRIM1-208ENST00000552590 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
PRIM1-208ENST00000552590 RASSF7Q02833 373 aa12.22□□□□□ -0.45
PRIM1-208ENST00000552590 TTC21BQ7Z4L5 1316 aa12.22□□□□□ -0.45
PRIM1-208ENST00000552590 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
PRIM1-208ENST00000552590 LCE2BO14633 110 aa12.21□□□□□ -0.45
PRIM1-208ENST00000552590 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
PRIM1-208ENST00000552590 FOXK1P85037 733 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 PLPP6Q8IY26 295 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 MCOLN1Q9GZU1 580 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 BCL2L12Q9HB09 334 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 CCDC87Q9NVE4 849 aa12.21□□□□□ -0.46
PRIM1-208ENST00000552590 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
PRIM1-208ENST00000552590 MAP2K1Q02750 393 aaPredicted RBP12.2□□□□□ -0.46
PRIM1-208ENST00000552590 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
PRIM1-208ENST00000552590 KDM6AO15550 1401 aaPredicted RBP12.18□□□□□ -0.46
PRIM1-208ENST00000552590 STK25O00506 426 aa12.18□□□□□ -0.46
PRIM1-208ENST00000552590 PASKQ96RG2 1323 aa12.18□□□□□ -0.46
PRIM1-208ENST00000552590 TMEM88BA6NKF7 163 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms