RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 PCNTO95613 3336 aa25.39■■□□□ 1.65
RPAP3-207ENST00000551293 CYP19A1P11511 503 aaPredicted RBP25.38■■□□□ 1.65
RPAP3-207ENST00000551293 ZBTB1Q9Y2K1 713 aa25.38■■□□□ 1.65
RPAP3-207ENST00000551293 SBF1O95248 1867 aa25.37■■□□□ 1.65
RPAP3-207ENST00000551293 TNRC6CQ9HCJ0 1690 aaKnown RBP25.37■■□□□ 1.65
RPAP3-207ENST00000551293 AKAP4Q5JQC9 854 aa25.37■■□□□ 1.65
RPAP3-207ENST00000551293 COL15A1P39059 1388 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 SERPINB2P05120 415 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 HMOX1P09601 288 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
RPAP3-207ENST00000551293 BICDL1Q6ZP65 573 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 TNS4Q8IZW8 715 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 NARFQ9UHQ1 456 aa25.36■■□□□ 1.65
RPAP3-207ENST00000551293 LMNB1P20700 586 aa25.35■■□□□ 1.65
RPAP3-207ENST00000551293 C2CD5Q86YS7 1000 aa25.35■■□□□ 1.65
RPAP3-207ENST00000551293 BCL2L12Q9HB09 334 aa25.35■■□□□ 1.65
RPAP3-207ENST00000551293 SCN11AQ9UI33 1791 aa25.35■■□□□ 1.65
RPAP3-207ENST00000551293 CARMIL3Q8ND23 1372 aa25.34■■□□□ 1.65
RPAP3-207ENST00000551293 RNMTO43148 476 aaKnown RBP25.34■■□□□ 1.65
RPAP3-207ENST00000551293 CANXP27824 592 aaKnown RBP25.34■■□□□ 1.65
RPAP3-207ENST00000551293 EIF4G2P78344 907 aaKnown RBP eCLIP25.34■■□□□ 1.65
RPAP3-207ENST00000551293 ZNF219Q9P2Y4 722 aaPredicted RBP25.34■■□□□ 1.65
RPAP3-207ENST00000551293 GLTPD2A6NH11 291 aa25.33■■□□□ 1.65
RPAP3-207ENST00000551293 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
RPAP3-207ENST00000551293 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
RPAP3-207ENST00000551293 VEGFAP15692 232 aaPredicted RBP25.32■■□□□ 1.64
RPAP3-207ENST00000551293 CCDC24Q8N4L8 307 aa25.32■■□□□ 1.64
RPAP3-207ENST00000551293 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
RPAP3-207ENST00000551293 AFDNP55196 1824 aaKnown RBP25.32■■□□□ 1.64
RPAP3-207ENST00000551293 NFKBIEO00221 500 aa25.3■■□□□ 1.64
RPAP3-207ENST00000551293 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
RPAP3-207ENST00000551293 H0YIN7 160 aa25.29■■□□□ 1.64
RPAP3-207ENST00000551293 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
RPAP3-207ENST00000551293 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
RPAP3-207ENST00000551293 MTHFSDQ2M296 383 aaKnown RBP25.28■■□□□ 1.64
RPAP3-207ENST00000551293 ZC3H4Q9UPT8 1303 aaKnown RBP25.28■■□□□ 1.64
RPAP3-207ENST00000551293 ZNF622Q969S3 477 aaKnown RBP eCLIP25.27■■□□□ 1.642e-7■■■□□ 16.3
RPAP3-207ENST00000551293 ZNF330Q9Y3S2 320 aaPredicted RBP25.27■■□□□ 1.64
RPAP3-207ENST00000551293 MRC1P22897 1456 aa25.26■■□□□ 1.63
RPAP3-207ENST00000551293 TIAM2Q8IVF5 1701 aa25.26■■□□□ 1.63
RPAP3-207ENST00000551293 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
RPAP3-207ENST00000551293 POTECB2RU33 542 aa25.25■■□□□ 1.63
RPAP3-207ENST00000551293 TBC1D9BQ66K14 1250 aa25.25■■□□□ 1.63
RPAP3-207ENST00000551293 C21orf2O43822 256 aa25.24■■□□□ 1.63
RPAP3-207ENST00000551293 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
RPAP3-207ENST00000551293 TBC1D2BQ9UPU7 963 aa25.22■■□□□ 1.63
RPAP3-207ENST00000551293 EIF5P55010 431 aaKnown RBP25.21■■□□□ 1.63
RPAP3-207ENST00000551293 ERFEQ4G0M1 354 aa25.21■■□□□ 1.63
RPAP3-207ENST00000551293 AMER1Q5JTC6 1135 aaPredicted RBP25.21■■□□□ 1.63
RPAP3-207ENST00000551293 TTC5Q8N0Z6 440 aa25.21■■□□□ 1.63
RPAP3-207ENST00000551293 CCDC88AQ3V6T2 1871 aa25.21■■□□□ 1.63
RPAP3-207ENST00000551293 STARD3NLO95772 234 aa25.2■■□□□ 1.62
RPAP3-207ENST00000551293 CNGB1Q14028 1251 aaPredicted RBP25.2■■□□□ 1.62
RPAP3-207ENST00000551293 DPY19L2Q6NUT2 758 aa25.2■■□□□ 1.62
RPAP3-207ENST00000551293 VSIG10Q8N0Z9 540 aa25.2■■□□□ 1.62
RPAP3-207ENST00000551293 ZNF496Q96IT1 587 aaPredicted RBP25.19■■□□□ 1.62
RPAP3-207ENST00000551293 POTEIP0CG38 1075 aa25.18■■□□□ 1.62
RPAP3-207ENST00000551293 POTEJP0CG39 1038 aa25.18■■□□□ 1.62
RPAP3-207ENST00000551293 PRR5LQ6MZQ0 368 aa25.18■■□□□ 1.62
RPAP3-207ENST00000551293 MKRN1Q9UHC7 482 aaKnown RBP25.18■■□□□ 1.62
RPAP3-207ENST00000551293 VIRMAQ69YN4 1812 aaKnown RBP25.18■■□□□ 1.62
RPAP3-207ENST00000551293 A0A087WZG4 1122 aa25.17■■□□□ 1.62
RPAP3-207ENST00000551293 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
RPAP3-207ENST00000551293 PDE6BP35913 854 aa25.16■■□□□ 1.62
RPAP3-207ENST00000551293 CC2D1BQ5T0F9 858 aaKnown RBP25.16■■□□□ 1.62
RPAP3-207ENST00000551293 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
RPAP3-207ENST00000551293 ANKRD31Q8N7Z5 1873 aa25.15■■□□□ 1.62
RPAP3-207ENST00000551293 NPHP1O15259 732 aa25.15■■□□□ 1.62
RPAP3-207ENST00000551293 DDNO94850 711 aaPredicted RBP25.15■■□□□ 1.62
RPAP3-207ENST00000551293 UBR2Q8IWV8 1755 aa25.14■■□□□ 1.62
RPAP3-207ENST00000551293 COL11A2P13942 1736 aaPredicted RBP25.14■■□□□ 1.61
RPAP3-207ENST00000551293 A1BGP04217 495 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 TEFQ10587 303 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 CHADLQ6NUI6 762 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 IL17REQ8NFR9 667 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 TAOK3Q9H2K8 898 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 HEG1Q9ULI3 1381 aa25.13■■□□□ 1.61
RPAP3-207ENST00000551293 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
RPAP3-207ENST00000551293 PIP4K2AP48426 406 aaPredicted RBP25.12■■□□□ 1.61
RPAP3-207ENST00000551293 ZNF790Q6PG37 636 aa25.12■■□□□ 1.61
RPAP3-207ENST00000551293 CNBD1Q8NA66 436 aa25.11■■□□□ 1.61
RPAP3-207ENST00000551293 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
RPAP3-207ENST00000551293 KCNQ3O43525 872 aa25.1■■□□□ 1.61
RPAP3-207ENST00000551293 PRPF40BQ6NWY9 871 aaKnown RBP25.1■■□□□ 1.61
RPAP3-207ENST00000551293 SETDB2Q96T68 719 aa25.1■■□□□ 1.61
RPAP3-207ENST00000551293 SCN7AQ01118 1682 aa25.1■■□□□ 1.61
RPAP3-207ENST00000551293 KIF7Q2M1P5 1343 aa25.09■■□□□ 1.61
RPAP3-207ENST00000551293 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.61
RPAP3-207ENST00000551293 CAMTA2O94983 1202 aa25.08■■□□□ 1.61
RPAP3-207ENST00000551293 IL6STP40189 918 aaPredicted RBP25.08■■□□□ 1.61
RPAP3-207ENST00000551293 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
RPAP3-207ENST00000551293 CREBZFQ9NS37 354 aa25.08■■□□□ 1.61
RPAP3-207ENST00000551293 FER1L6Q2WGJ9 1857 aa25.07■■□□□ 1.6
RPAP3-207ENST00000551293 ST5P78524 1137 aa25.07■■□□□ 1.6
RPAP3-207ENST00000551293 CNKSR1Q969H4 720 aa25.07■■□□□ 1.6
RPAP3-207ENST00000551293 TEX13AQ9BXU3 409 aaPredicted RBP25.07■■□□□ 1.6
RPAP3-207ENST00000551293 PDZRN3Q9UPQ7 1066 aa25.07■■□□□ 1.6
RPAP3-207ENST00000551293 SRGNP10124 158 aa25.06■■□□□ 1.6
RPAP3-207ENST00000551293 FMNL2Q96PY5 1086 aa25.06■■□□□ 1.6
RPAP3-207ENST00000551293 SLX4Q8IY92 1834 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms