RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-207ENST00000550051 FSTL1Q12841 308 aa13.45□□□□□ -0.26
TRAFD1-207ENST00000550051 KDM2BQ8NHM5 1336 aa13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 ZPR1O75312 459 aa13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 KNSTRNQ9Y448 316 aa13.44□□□□□ -0.26
TRAFD1-207ENST00000550051 CHRNA5P30532 468 aa13.43□□□□□ -0.26
TRAFD1-207ENST00000550051 DNAJC10Q8IXB1 793 aa13.43□□□□□ -0.26
TRAFD1-207ENST00000550051 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-207ENST00000550051 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-207ENST00000550051 USPL1Q5W0Q7 1092 aa13.42□□□□□ -0.26
TRAFD1-207ENST00000550051 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
TRAFD1-207ENST00000550051 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
TRAFD1-207ENST00000550051 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
TRAFD1-207ENST00000550051 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-207ENST00000550051 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-207ENST00000550051 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
TRAFD1-207ENST00000550051 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
TRAFD1-207ENST00000550051 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
TRAFD1-207ENST00000550051 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-207ENST00000550051 WDR90Q96KV7 1748 aa13.4□□□□□ -0.26
TRAFD1-207ENST00000550051 NFIXQ14938 502 aa13.4□□□□□ -0.26
TRAFD1-207ENST00000550051 KLRG1Q96E93 195 aa13.4□□□□□ -0.26
TRAFD1-207ENST00000550051 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-207ENST00000550051 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 NRXN2Q9P2S2 1712 aa13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 MRC1P22897 1456 aa13.39□□□□□ -0.27
TRAFD1-207ENST00000550051 SERPINB2P05120 415 aa13.38□□□□□ -0.27
TRAFD1-207ENST00000550051 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-207ENST00000550051 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 GLTPD2A6NH11 291 aa13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 LMNB1P20700 586 aa13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 TTLL6Q8N841 843 aa13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
TRAFD1-207ENST00000550051 COL15A1P39059 1388 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 DLEC1Q9Y238 1755 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 H0YIN7 160 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 STARD3NLO95772 234 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 HMOX1P09601 288 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 HTRA3P83110 453 aa13.36□□□□□ -0.27
TRAFD1-207ENST00000550051 A0A087WZG4 1122 aa13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 PRELPP51888 382 aa13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 TEX13AQ9BXU3 409 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
TRAFD1-207ENST00000550051 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-207ENST00000550051 RASSF7Q02833 373 aa13.34□□□□□ -0.27
TRAFD1-207ENST00000550051 C2CD5Q86YS7 1000 aa13.34□□□□□ -0.27
TRAFD1-207ENST00000550051 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
TRAFD1-207ENST00000550051 NFKBIEO00221 500 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 PDE6BP35913 854 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 IL17REQ8NFR9 667 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
TRAFD1-207ENST00000550051 POTECB2RU33 542 aa13.31□□□□□ -0.28
TRAFD1-207ENST00000550051 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-207ENST00000550051 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
TRAFD1-207ENST00000550051 DPY19L2Q6NUT2 758 aa13.31□□□□□ -0.28
TRAFD1-207ENST00000550051 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-207ENST00000550051 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 TEFQ10587 303 aa13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 DICER1Q9UPY3 1922 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
TRAFD1-207ENST00000550051 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
TRAFD1-207ENST00000550051 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
TRAFD1-207ENST00000550051 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
TRAFD1-207ENST00000550051 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■□□□ 11.8
TRAFD1-207ENST00000550051 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
TRAFD1-207ENST00000550051 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 C21orf2O43822 256 aa13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 PRR5LQ6MZQ0 368 aa13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 LTBP3Q9NS15 1303 aa13.28□□□□□ -0.28
TRAFD1-207ENST00000550051 A1BGP04217 495 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 STYK1Q6J9G0 422 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 SETDB2Q96T68 719 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 PCNTO95613 3336 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.29
TRAFD1-207ENST00000550051 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms