RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 NLRP6P59044 892 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
RAPGEF3-218ENST00000548919 PTMAP06454 111 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 CPA1P15085 419 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 PI4K2BQ8TCG2 481 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 PDCL3Q9H2J4 239 aa17.09■□□□□ 0.33
RAPGEF3-218ENST00000548919 SRGAP3O43295 1099 aa17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 SYAP1Q96A49 352 aaPredicted RBP17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.33
RAPGEF3-218ENST00000548919 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
RAPGEF3-218ENST00000548919 UQCRHP07919 91 aa17.08■□□□□ 0.32
RAPGEF3-218ENST00000548919 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
RAPGEF3-218ENST00000548919 HOXC9P31274 260 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 AK2P54819 239 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 RAD50Q92878 1312 aa17.07■□□□□ 0.32
RAPGEF3-218ENST00000548919 SGSM2O43147 1006 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 ZMYND15Q9H091 742 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 AOX1Q06278 1338 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 ZNF830Q96NB3 372 aaPredicted RBP17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 PIK3C2AO00443 1686 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 ANXA1P04083 346 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 TERF1P54274 439 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 RUFY3Q7L099 469 aa17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
RAPGEF3-218ENST00000548919 MCM5P33992 734 aa17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 PLEKHG1Q9ULL1 1385 aa17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 POLA2Q14181 598 aa17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 TTC14Q96N46 770 aa17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
RAPGEF3-218ENST00000548919 CACNA1FO60840 1977 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 LARGE1O95461 756 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 PHF14O94880 888 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 SYT1P21579 422 aa17.04■□□□□ 0.32
RAPGEF3-218ENST00000548919 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 FIBPO43427 364 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 KIF1BPQ96EK5 621 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 ARID3AQ99856 593 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 PXDNLA1KZ92 1463 aa17.03■□□□□ 0.32
RAPGEF3-218ENST00000548919 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
RAPGEF3-218ENST00000548919 STX6O43752 255 aa17.02■□□□□ 0.32
RAPGEF3-218ENST00000548919 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
RAPGEF3-218ENST00000548919 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
RAPGEF3-218ENST00000548919 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
RAPGEF3-218ENST00000548919 KCNQ3O43525 872 aa17.02■□□□□ 0.31
RAPGEF3-218ENST00000548919 C14orf37Q86TY3 774 aa17.02■□□□□ 0.31
RAPGEF3-218ENST00000548919 LGR6Q9HBX8 967 aa17.02■□□□□ 0.31
RAPGEF3-218ENST00000548919 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.31
RAPGEF3-218ENST00000548919 CCDC183Q5T5S1 534 aa17.01■□□□□ 0.31
RAPGEF3-218ENST00000548919 N4BP2Q86UW6 1770 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF3-218ENST00000548919 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF3-218ENST00000548919 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
RAPGEF3-218ENST00000548919 PTH1RQ03431 593 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 C17orf53Q8N3J3 647 aaPredicted RBP17■□□□□ 0.31
RAPGEF3-218ENST00000548919 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
RAPGEF3-218ENST00000548919 DIP2AQ14689 1571 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 BEND3Q5T5X7 828 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 TMEM87AQ8NBN3 555 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 F13A1P00488 732 aa17■□□□□ 0.31
RAPGEF3-218ENST00000548919 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
RAPGEF3-218ENST00000548919 ADCY5O95622 1261 aa16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 SASS6Q6UVJ0 657 aa16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms