RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 KSR2Q6VAB6 950 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 ROBO1Q9Y6N7 1651 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 ALDH1L1O75891 902 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 SLC39A6Q13433 755 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
TMTC3-202ENST00000547034 SSH3Q8TE77 659 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 OSBPL3Q9H4L5 887 aa21.32■■□□□ 1
TMTC3-202ENST00000547034 TUBGCP6Q96RT7 1819 aa21.31■■□□□ 1
TMTC3-202ENST00000547034 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
TMTC3-202ENST00000547034 LTBP4Q8N2S1 1624 aa21.3■■□□□ 1
TMTC3-202ENST00000547034 POLA2Q14181 598 aa21.3■■□□□ 1
TMTC3-202ENST00000547034 C16orf71Q8IYS4 520 aaPredicted RBP21.3■■□□□ 1
TMTC3-202ENST00000547034 ZCRB1Q8TBF4 217 aaKnown RBP21.3■■□□□ 1
TMTC3-202ENST00000547034 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
TMTC3-202ENST00000547034 RBM25P49756 843 aaKnown RBP21.29■■□□□ 1
TMTC3-202ENST00000547034 DAXXQ9UER7 740 aaPredicted RBP21.29■■□□□ 1
TMTC3-202ENST00000547034 COL14A1Q05707 1796 aaKnown RBP21.29■■□□□ 1
TMTC3-202ENST00000547034 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
TMTC3-202ENST00000547034 SMARCA5O60264 1052 aaPredicted RBP21.29■■□□□ 1
TMTC3-202ENST00000547034 CDC45O75419 566 aa21.29■■□□□ 1
TMTC3-202ENST00000547034 IL2RBP14784 551 aa21.29■■□□□ 1
TMTC3-202ENST00000547034 TBC1D9Q6ZT07 1266 aa21.29■■□□□ 1
TMTC3-202ENST00000547034 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
TMTC3-202ENST00000547034 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
TMTC3-202ENST00000547034 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
TMTC3-202ENST00000547034 EIF5BO60841 1220 aaKnown RBP21.27■■□□□ 1
TMTC3-202ENST00000547034 CABP4P57796 275 aa21.27■■□□□ 1
TMTC3-202ENST00000547034 BECN1Q14457 450 aa21.27■■□□□ 1
TMTC3-202ENST00000547034 ERVV-2B6SEH9 535 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 DDX58O95786 925 aaKnown RBP21.27■□□□□ 0.99
TMTC3-202ENST00000547034 NBPF7P0C2Y1 421 aaPredicted RBP21.27■□□□□ 0.99
TMTC3-202ENST00000547034 SLC4A3P48751 1232 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 MTX1Q13505 466 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 LRP10Q7Z4F1 713 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 TTC5Q8N0Z6 440 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 FMNL2Q96PY5 1086 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 LRRCC1Q9C099 1032 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 EXOC6BQ9Y2D4 811 aa21.27■□□□□ 0.99
TMTC3-202ENST00000547034 UTYO14607 1347 aa21.26■□□□□ 0.99
TMTC3-202ENST00000547034 MYT1Q01538 1121 aa21.25■□□□□ 0.99
TMTC3-202ENST00000547034 LARP1Q6PKG0 1096 aaKnown RBP21.25■□□□□ 0.99
TMTC3-202ENST00000547034 LINS1Q8NG48 757 aa21.25■□□□□ 0.99
TMTC3-202ENST00000547034 COL16A1Q07092 1604 aaPredicted RBP21.25■□□□□ 0.99
TMTC3-202ENST00000547034 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
TMTC3-202ENST00000547034 TOGARAM1Q9Y4F4 1720 aa21.24■□□□□ 0.99
TMTC3-202ENST00000547034 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
TMTC3-202ENST00000547034 PDE1AP54750 535 aa21.24■□□□□ 0.99
TMTC3-202ENST00000547034 PPP1R42Q7Z4L9 355 aa21.24■□□□□ 0.99
TMTC3-202ENST00000547034 HDAC5Q9UQL6 1122 aa21.24■□□□□ 0.99
TMTC3-202ENST00000547034 TNS2Q63HR2 1409 aa21.23■□□□□ 0.99
TMTC3-202ENST00000547034 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
TMTC3-202ENST00000547034 APBB1O00213 710 aa21.22■□□□□ 0.99
TMTC3-202ENST00000547034 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
TMTC3-202ENST00000547034 STAP2Q9UGK3 403 aa21.22■□□□□ 0.99
TMTC3-202ENST00000547034 DISP2A7MBM2 1401 aa21.22■□□□□ 0.99
TMTC3-202ENST00000547034 SDSP20132 328 aa21.21■□□□□ 0.99
TMTC3-202ENST00000547034 EVA1CP58658 441 aa21.21■□□□□ 0.99
TMTC3-202ENST00000547034 STRN4Q9NRL3 753 aa21.21■□□□□ 0.99
TMTC3-202ENST00000547034 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
TMTC3-202ENST00000547034 AOX1Q06278 1338 aa21.21■□□□□ 0.99
TMTC3-202ENST00000547034 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
TMTC3-202ENST00000547034 ARFGEF2Q9Y6D5 1785 aa21.2■□□□□ 0.98
TMTC3-202ENST00000547034 WNK3Q9BYP7 1800 aa21.19■□□□□ 0.98
TMTC3-202ENST00000547034 SRGAP3O43295 1099 aa21.19■□□□□ 0.98
TMTC3-202ENST00000547034 XAGE3Q8WTP9 111 aa21.19■□□□□ 0.98
TMTC3-202ENST00000547034 GRM8O00222 908 aa21.18■□□□□ 0.98
TMTC3-202ENST00000547034 MX1P20591 662 aa21.18■□□□□ 0.98
TMTC3-202ENST00000547034 CWF19L2Q2TBE0 894 aaKnown RBP21.18■□□□□ 0.98
TMTC3-202ENST00000547034 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
TMTC3-202ENST00000547034 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
TMTC3-202ENST00000547034 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
TMTC3-202ENST00000547034 HSP90AB4PQ58FF6 505 aa21.18■□□□□ 0.98
TMTC3-202ENST00000547034 LRP6O75581 1613 aa21.17■□□□□ 0.98
TMTC3-202ENST00000547034 AIMP1Q12904 312 aaKnown RBP21.17■□□□□ 0.98
TMTC3-202ENST00000547034 COPS6Q7L5N1 327 aa21.17■□□□□ 0.98
TMTC3-202ENST00000547034 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
TMTC3-202ENST00000547034 SURF6O75683 361 aaKnown RBP21.16■□□□□ 0.98
TMTC3-202ENST00000547034 MYL6BP14649 208 aa21.16■□□□□ 0.98
TMTC3-202ENST00000547034 KIF1BPQ96EK5 621 aa21.16■□□□□ 0.98
TMTC3-202ENST00000547034 BTG4Q9NY30 223 aa21.16■□□□□ 0.98
TMTC3-202ENST00000547034 COL15A1P39059 1388 aa21.16■□□□□ 0.98
TMTC3-202ENST00000547034 NUP188Q5SRE5 1749 aa21.16■□□□□ 0.98
TMTC3-202ENST00000547034 NEURL1BA8MQ27 555 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 KIF2CQ99661 725 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 AFDNP55196 1824 aaKnown RBP21.15■□□□□ 0.98
TMTC3-202ENST00000547034 NEXNQ0ZGT2 675 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 ANKRD13DQ6ZTN6 518 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 SNX21Q969T3 373 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 KAZALD1Q96I82 304 aa21.15■□□□□ 0.98
TMTC3-202ENST00000547034 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
TMTC3-202ENST00000547034 USP35Q9P2H5 1018 aa21.14■□□□□ 0.97
TMTC3-202ENST00000547034 PHLPP1O60346 1717 aa21.14■□□□□ 0.97
TMTC3-202ENST00000547034 NBR1Q14596 966 aa21.13■□□□□ 0.97
TMTC3-202ENST00000547034 GCKRQ14397 625 aa21.13■□□□□ 0.97
TMTC3-202ENST00000547034 DDX54Q8TDD1 881 aaKnown RBP21.13■□□□□ 0.97
TMTC3-202ENST00000547034 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
TMTC3-202ENST00000547034 NRAPQ86VF7 1730 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms