RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 HSPA1LP34931 641 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 JDP2Q8WYK2 163 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 KRT32Q14532 448 aa12.31□□□□□ -0.44
SSH1-203ENST00000546433 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
SSH1-203ENST00000546433 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
SSH1-203ENST00000546433 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
SSH1-203ENST00000546433 CDKL5O76039 1030 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 SMC2O95347 1197 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 LTKP29376 864 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 ARHGEF12Q9NZN5 1544 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 KRT85P78386 507 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 SETDB2Q96T68 719 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
SSH1-203ENST00000546433 MYO1BO43795 1136 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 GCP02774 474 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
SSH1-203ENST00000546433 HDAC9Q9UKV0 1011 aa12.29□□□□□ -0.44
SSH1-203ENST00000546433 DDX46Q7L014 1031 aaKnown RBP12.29□□□□□ -0.44
SSH1-203ENST00000546433 FIBPO43427 364 aa12.29□□□□□ -0.44
SSH1-203ENST00000546433 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
SSH1-203ENST00000546433 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
SSH1-203ENST00000546433 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
SSH1-203ENST00000546433 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
SSH1-203ENST00000546433 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
SSH1-203ENST00000546433 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
SSH1-203ENST00000546433 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 CCDC69A6NI79 296 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 STIM1Q13586 685 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
SSH1-203ENST00000546433 NOL7Q9UMY1 257 aaKnown RBP12.28□□□□□ -0.44
SSH1-203ENST00000546433 CBFA2T2O43439 604 aa12.27□□□□□ -0.44
SSH1-203ENST00000546433 MYL6BP14649 208 aa12.27□□□□□ -0.44
SSH1-203ENST00000546433 BLOC1S2Q6QNY1 142 aa12.27□□□□□ -0.44
SSH1-203ENST00000546433 PUS7Q96PZ0 661 aaKnown RBP12.27□□□□□ -0.44
SSH1-203ENST00000546433 LUC7LQ9NQ29 371 aaKnown RBP12.27□□□□□ -0.44
SSH1-203ENST00000546433 ZNHIT6Q9NWK9 470 aaKnown RBP12.27□□□□□ -0.44
SSH1-203ENST00000546433 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
SSH1-203ENST00000546433 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
SSH1-203ENST00000546433 USHBP1Q8N6Y0 703 aa12.27□□□□□ -0.45
SSH1-203ENST00000546433 TNMDQ9H2S6 317 aa12.27□□□□□ -0.45
SSH1-203ENST00000546433 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
SSH1-203ENST00000546433 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
SSH1-203ENST00000546433 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
SSH1-203ENST00000546433 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
SSH1-203ENST00000546433 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 AACSQ86V21 672 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 ANKRD36BQ8N2N9 1353 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 WASF1Q92558 559 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
SSH1-203ENST00000546433 AGLP35573 1532 aa12.26□□□□□ -0.45
SSH1-203ENST00000546433 SOGA3Q5TF21 947 aa12.25□□□□□ -0.45
SSH1-203ENST00000546433 KRT18P05783 430 aaKnown RBP12.25□□□□□ -0.45
SSH1-203ENST00000546433 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
SSH1-203ENST00000546433 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
SSH1-203ENST00000546433 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 SUPT20HQ8NEM7 779 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 ME1P48163 572 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
SSH1-203ENST00000546433 GNPATO15228 680 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 SERPINC1P01008 464 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 PPFIBP1Q86W92 1011 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 EYA3Q99504 573 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 SYCP1Q15431 976 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 SIL1Q9H173 461 aa12.24□□□□□ -0.45
SSH1-203ENST00000546433 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
SSH1-203ENST00000546433 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
SSH1-203ENST00000546433 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
SSH1-203ENST00000546433 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
SSH1-203ENST00000546433 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
SSH1-203ENST00000546433 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 PTPRTO14522 1441 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 KIF1BPQ96EK5 621 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 SPATA32Q96LK8 384 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 FLT4P35916 1363 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
SSH1-203ENST00000546433 IP6K1Q92551 441 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 H0YIN7 160 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 WWC2Q6AWC2 1192 aa12.22□□□□□ -0.45
SSH1-203ENST00000546433 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms