RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 OVOS2Q6IE36 1432 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 SPDYE4A6NLX3 237 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 RLBP1P12271 317 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 GTF2A1P52655 376 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 LRRC7Q96NW7 1537 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 ICE2Q659A1 982 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 RTF1Q92541 710 aaKnown RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 BSDC1Q9NW68 430 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 NALCNQ8IZF0 1738 aa8.11□□□□□ -1.11
NECAP1-208ENST00000545807 AATKQ6ZMQ8 1374 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 TERF2Q15554 542 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 MBIPQ9NS73 344 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 CHMP5Q9NZZ3 219 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 AXIN2Q9Y2T1 843 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 FLT4P35916 1363 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 C8orf58Q8NAV2 365 aa8.1□□□□□ -1.11
NECAP1-208ENST00000545807 MAFGO15525 162 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 KIF1CO43896 1103 aaKnown RBP8.09□□□□□ -1.11
NECAP1-208ENST00000545807 GPATCH11Q8N954 259 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 SGSM3Q96HU1 749 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 SSH2Q76I76 1423 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 MSH6P52701 1360 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 MON2Q7Z3U7 1717 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 SKOR2Q2VWA4 1001 aaPredicted RBP8.09□□□□□ -1.11
NECAP1-208ENST00000545807 NOB1Q9ULX3 412 aaKnown RBP8.09□□□□□ -1.11
NECAP1-208ENST00000545807 U2AF2P26368 475 aaKnown RBP eCLIP8.09□□□□□ -1.113e-6■■■■□ 23.7
NECAP1-208ENST00000545807 ANAPC15P60006 121 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
NECAP1-208ENST00000545807 ANKARQ7Z5J8 1434 aa8.09□□□□□ -1.12
NECAP1-208ENST00000545807 AKAP12Q02952 1782 aa8.09□□□□□ -1.12
NECAP1-208ENST00000545807 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 ZNF142P52746 1687 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-208ENST00000545807 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 CDK12Q9NYV4 1490 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-208ENST00000545807 KAT6BQ8WYB5 2073 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 CC2D2BQ6DHV5 1058 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 MPNDQ8N594 471 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 ADGRB2O60241 1585 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 IQSEC2Q5JU85 1478 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 PIP4K2BP78356 416 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 JARID2Q92833 1246 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-208ENST00000545807 TBC1D2Q9BYX2 928 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 RSPH14Q9UHP6 348 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 ANKRD26Q9UPS8 1709 aa8.08□□□□□ -1.12
NECAP1-208ENST00000545807 CCDC189A1A4V9 331 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 TWISTNBQ3B726 338 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-208ENST00000545807 BRINP3Q76B58 766 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 STRN4Q9NRL3 753 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 RBM28Q9NW13 759 aaKnown RBP8.07□□□□□ -1.12
NECAP1-208ENST00000545807 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 GNAI1P63096 354 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 ZKSCAN8Q15776 578 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-208ENST00000545807 IP6K1Q92551 441 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 BORCS6Q96GS4 357 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 MED4Q9NPJ6 270 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 TSPYL4Q9UJ04 414 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 NBPF5PQ86XG9 351 aaPredicted RBP8.07□□□□□ -1.12
NECAP1-208ENST00000545807 KCNH5Q8NCM2 988 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 TSC1Q92574 1164 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 LMTK3Q96Q04 1460 aa8.07□□□□□ -1.12
NECAP1-208ENST00000545807 NCOA3Q9Y6Q9 1424 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 ZKSCAN2Q63HK3 967 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 C1orf115Q9H7X2 142 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 LGR6Q9HBX8 967 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 PIK3C2AO00443 1686 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 TRIM27P14373 513 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 TNNT3P45378 269 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-208ENST00000545807 RAD51AP2Q09MP3 1159 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 ZNF530Q6P9A1 599 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-208ENST00000545807 UPF2Q9HAU5 1272 aaKnown RBP8.06□□□□□ -1.12
NECAP1-208ENST00000545807 MORC2Q9Y6X9 1032 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-208ENST00000545807 PEAK1Q9H792 1746 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 TOPAZ1Q8N9V7 1692 aa8.06□□□□□ -1.12
NECAP1-208ENST00000545807 A0A0G2JS52 829 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
NECAP1-208ENST00000545807 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
NECAP1-208ENST00000545807 NPHP3Q7Z494 1330 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 DDIT3P35638 169 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
NECAP1-208ENST00000545807 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 CCDC39Q9UFE4 941 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 CTIFO43310 598 aaKnown RBP8.05□□□□□ -1.12
NECAP1-208ENST00000545807 VAMP4O75379 141 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms