RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
SMAD7-202ENST00000545051 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
SMAD7-202ENST00000545051 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
SMAD7-202ENST00000545051 CUL4AQ13619 759 aa17.53■□□□□ 0.4
SMAD7-202ENST00000545051 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
SMAD7-202ENST00000545051 PXDNQ92626 1479 aa17.52■□□□□ 0.4
SMAD7-202ENST00000545051 INTS4Q96HW7 963 aaKnown RBP17.52■□□□□ 0.4
SMAD7-202ENST00000545051 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.39
SMAD7-202ENST00000545051 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.39
SMAD7-202ENST00000545051 HTATSF1O43719 755 aaKnown RBP17.52■□□□□ 0.39
SMAD7-202ENST00000545051 OFD1O75665 1012 aa17.52■□□□□ 0.39
SMAD7-202ENST00000545051 RBM27Q9P2N5 1060 aaKnown RBP17.52■□□□□ 0.39
SMAD7-202ENST00000545051 AOX1Q06278 1338 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 BRD1O95696 1058 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 IL17RAQ96F46 866 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 JCADQ9P266 1359 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 FLIIQ13045 1269 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 TMEM63CQ9P1W3 806 aa17.51■□□□□ 0.39
SMAD7-202ENST00000545051 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
SMAD7-202ENST00000545051 CHMLP26374 656 aa17.5■□□□□ 0.39
SMAD7-202ENST00000545051 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
SMAD7-202ENST00000545051 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
SMAD7-202ENST00000545051 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
SMAD7-202ENST00000545051 PIK3C2AO00443 1686 aa17.5■□□□□ 0.39
SMAD7-202ENST00000545051 TERF1P54274 439 aa17.49■□□□□ 0.39
SMAD7-202ENST00000545051 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
SMAD7-202ENST00000545051 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
SMAD7-202ENST00000545051 SOX12O15370 315 aa17.49■□□□□ 0.39
SMAD7-202ENST00000545051 SYCE3A1L190 88 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 TRIM6-TRIM34B2RNG4 842 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 ZNF500O60304 480 aaPredicted RBP17.48■□□□□ 0.39
SMAD7-202ENST00000545051 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
SMAD7-202ENST00000545051 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
SMAD7-202ENST00000545051 EYA1Q99502 592 aa17.47■□□□□ 0.39
SMAD7-202ENST00000545051 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
SMAD7-202ENST00000545051 SPATA31A3Q5VYP0 1347 aa17.46■□□□□ 0.39
SMAD7-202ENST00000545051 TNS3Q68CZ2 1445 aa17.46■□□□□ 0.39
SMAD7-202ENST00000545051 MCM5P33992 734 aa17.46■□□□□ 0.39
SMAD7-202ENST00000545051 AMPHP49418 695 aa17.46■□□□□ 0.39
SMAD7-202ENST00000545051 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
SMAD7-202ENST00000545051 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
SMAD7-202ENST00000545051 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
SMAD7-202ENST00000545051 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
SMAD7-202ENST00000545051 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
SMAD7-202ENST00000545051 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
SMAD7-202ENST00000545051 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
SMAD7-202ENST00000545051 ZKSCAN5Q9Y2L8 839 aa17.45■□□□□ 0.38
SMAD7-202ENST00000545051 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
SMAD7-202ENST00000545051 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
SMAD7-202ENST00000545051 SPATA31A6Q5VVP1 1343 aa17.44■□□□□ 0.38
SMAD7-202ENST00000545051 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
SMAD7-202ENST00000545051 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
SMAD7-202ENST00000545051 PHF14O94880 888 aa17.43■□□□□ 0.38
SMAD7-202ENST00000545051 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
SMAD7-202ENST00000545051 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
SMAD7-202ENST00000545051 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
SMAD7-202ENST00000545051 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
SMAD7-202ENST00000545051 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.43■□□□□ 0.38
SMAD7-202ENST00000545051 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
SMAD7-202ENST00000545051 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
SMAD7-202ENST00000545051 HSPA4P34932 840 aa17.42■□□□□ 0.38
SMAD7-202ENST00000545051 CSPP1Q1MSJ5 1256 aa17.42■□□□□ 0.38
SMAD7-202ENST00000545051 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
SMAD7-202ENST00000545051 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
SMAD7-202ENST00000545051 SSH3Q8TE77 659 aa17.41■□□□□ 0.38
SMAD7-202ENST00000545051 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
SMAD7-202ENST00000545051 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
SMAD7-202ENST00000545051 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
SMAD7-202ENST00000545051 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
SMAD7-202ENST00000545051 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
SMAD7-202ENST00000545051 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
SMAD7-202ENST00000545051 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
SMAD7-202ENST00000545051 RAD50Q92878 1312 aa17.39■□□□□ 0.37
SMAD7-202ENST00000545051 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
SMAD7-202ENST00000545051 PDCL3Q9H2J4 239 aa17.39■□□□□ 0.37
SMAD7-202ENST00000545051 POLA2Q14181 598 aa17.38■□□□□ 0.37
SMAD7-202ENST00000545051 TMEM87AQ8NBN3 555 aa17.38■□□□□ 0.37
SMAD7-202ENST00000545051 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
SMAD7-202ENST00000545051 HOXC9P31274 260 aa17.37■□□□□ 0.37
SMAD7-202ENST00000545051 RNF214Q8ND24 703 aa17.37■□□□□ 0.37
SMAD7-202ENST00000545051 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
SMAD7-202ENST00000545051 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
SMAD7-202ENST00000545051 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
SMAD7-202ENST00000545051 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
SMAD7-202ENST00000545051 SGSM2O43147 1006 aa17.36■□□□□ 0.37
SMAD7-202ENST00000545051 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
SMAD7-202ENST00000545051 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
SMAD7-202ENST00000545051 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
SMAD7-202ENST00000545051 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms