RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PKD1L3Q7Z443 1732 aa9.94□□□□□ -0.82
CPSF7-224ENST00000544990 PLEKHG2Q9H7P9 1386 aa9.94□□□□□ -0.82
CPSF7-224ENST00000544990 PSDA5PKW4 1024 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-224ENST00000544990 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
CPSF7-224ENST00000544990 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
CPSF7-224ENST00000544990 ZC3H15Q8WU90 426 aaKnown RBP9.94□□□□□ -0.82
CPSF7-224ENST00000544990 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
CPSF7-224ENST00000544990 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
CPSF7-224ENST00000544990 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
CPSF7-224ENST00000544990 KIF3CO14782 793 aa9.93□□□□□ -0.82
CPSF7-224ENST00000544990 TXNRD1Q16881 649 aa9.93□□□□□ -0.82
CPSF7-224ENST00000544990 PLEKHO1Q53GL0 409 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-224ENST00000544990 IFNL2Q8IZJ0 200 aa9.93□□□□□ -0.82
CPSF7-224ENST00000544990 CYP27B1O15528 508 aa9.92□□□□□ -0.82
CPSF7-224ENST00000544990 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
CPSF7-224ENST00000544990 IL13P35225 146 aa9.92□□□□□ -0.82
CPSF7-224ENST00000544990 AMOTQ4VCS5 1084 aa9.92□□□□□ -0.82
CPSF7-224ENST00000544990 SULT6B1Q6IMI4 303 aa9.92□□□□□ -0.82
CPSF7-224ENST00000544990 TBC1D12O60347 775 aa9.91□□□□□ -0.82
CPSF7-224ENST00000544990 HMGB2P26583 209 aaKnown RBP9.91□□□□□ -0.82
CPSF7-224ENST00000544990 PDIA6Q15084 440 aa9.91□□□□□ -0.82
CPSF7-224ENST00000544990 SLC27A3Q5K4L6 730 aa9.91□□□□□ -0.82
CPSF7-224ENST00000544990 CFAP53Q96M91 514 aa9.91□□□□□ -0.82
CPSF7-224ENST00000544990 HSP90AB1P08238 724 aaKnown RBP9.9□□□□□ -0.82
CPSF7-224ENST00000544990 PHKG2P15735 406 aa9.9□□□□□ -0.82
CPSF7-224ENST00000544990 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.82
CPSF7-224ENST00000544990 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-224ENST00000544990 STK32BQ9NY57 414 aa9.9□□□□□ -0.82
CPSF7-224ENST00000544990 ITGB4P16144 1822 aa9.9□□□□□ -0.82
CPSF7-224ENST00000544990 KDRP35968 1356 aa9.89□□□□□ -0.83
CPSF7-224ENST00000544990 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-224ENST00000544990 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-224ENST00000544990 C1orf141Q5JVX7 400 aa9.89□□□□□ -0.83
CPSF7-224ENST00000544990 ZNF530Q6P9A1 599 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-224ENST00000544990 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
CPSF7-224ENST00000544990 LY75O60449 1722 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
CPSF7-224ENST00000544990 HMOX1P09601 288 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 SLC15A2Q16348 729 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 SMARCC1Q92922 1105 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-224ENST00000544990 DCAF5Q96JK2 942 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 TMOD3Q9NYL9 352 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 NUDCQ9Y266 331 aa9.88□□□□□ -0.83
CPSF7-224ENST00000544990 ERVV-2B6SEH9 535 aa9.87□□□□□ -0.83
CPSF7-224ENST00000544990 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
CPSF7-224ENST00000544990 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
CPSF7-224ENST00000544990 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-224ENST00000544990 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-224ENST00000544990 TOGARAM1Q9Y4F4 1720 aa9.87□□□□□ -0.83
CPSF7-224ENST00000544990 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
CPSF7-224ENST00000544990 PIGBQ92521 554 aa9.86□□□□□ -0.83
CPSF7-224ENST00000544990 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
CPSF7-224ENST00000544990 PALLDQ8WX93 1383 aa9.86□□□□□ -0.83
CPSF7-224ENST00000544990 LRP5O75197 1615 aa9.85□□□□□ -0.83
CPSF7-224ENST00000544990 CABP4P57796 275 aa9.85□□□□□ -0.83
CPSF7-224ENST00000544990 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
CPSF7-224ENST00000544990 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
CPSF7-224ENST00000544990 KRI1Q8N9T8 703 aaKnown RBP9.85□□□□□ -0.83
CPSF7-224ENST00000544990 SPON1Q9HCB6 807 aa9.85□□□□□ -0.83
CPSF7-224ENST00000544990 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.85□□□□□ -0.83
CPSF7-224ENST00000544990 COL3A1P02461 1466 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-224ENST00000544990 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 ZMYND10O75800 440 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 KCNQ4P56696 695 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 RALBP1Q15311 655 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 TFCP2L1Q9NZI6 479 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 PAPPAQ13219 1627 aa9.84□□□□□ -0.83
CPSF7-224ENST00000544990 POTEIP0CG38 1075 aa9.83□□□□□ -0.84
CPSF7-224ENST00000544990 U2AF1L5P0DN76 240 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-224ENST00000544990 U2AF1Q01081 240 aaKnown RBP eCLIP9.83□□□□□ -0.84
CPSF7-224ENST00000544990 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
CPSF7-224ENST00000544990 OXER1Q8TDS5 423 aa9.83□□□□□ -0.84
CPSF7-224ENST00000544990 SCN11AQ9UI33 1791 aa9.83□□□□□ -0.84
CPSF7-224ENST00000544990 QSER1Q2KHR3 1735 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 VIRMAQ69YN4 1812 aaKnown RBP9.82□□□□□ -0.84
CPSF7-224ENST00000544990 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 LOC102724428A0A0B4J2F2 783 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 FCHSD2O94868 740 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 NEFMP07197 916 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 SIK1P57059 783 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 ZNF827Q17R98 1081 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 PPP1R1BQ9UD71 204 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-224ENST00000544990 ASAP1Q9ULH1 1129 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 C5P01031 1676 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 CASZ1Q86V15 1759 aa9.82□□□□□ -0.84
CPSF7-224ENST00000544990 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-224ENST00000544990 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
CPSF7-224ENST00000544990 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
CPSF7-224ENST00000544990 PRKAR2BP31323 418 aa9.81□□□□□ -0.84
CPSF7-224ENST00000544990 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
CPSF7-224ENST00000544990 FLAD1Q8NFF5 587 aa9.81□□□□□ -0.84
CPSF7-224ENST00000544990 MTFR1LQ9H019 292 aa9.81□□□□□ -0.84
CPSF7-224ENST00000544990 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms