RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
TNC-213ENST00000544972 LAMB4A4D0S4 1761 aa14.37□□□□□ -0.11
TNC-213ENST00000544972 SLC4A10Q6U841 1118 aa14.36□□□□□ -0.11
TNC-213ENST00000544972 SKAP1Q86WV1 359 aa14.36□□□□□ -0.11
TNC-213ENST00000544972 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
TNC-213ENST00000544972 USP21Q9UK80 565 aa14.36□□□□□ -0.11
TNC-213ENST00000544972 PXDNLA1KZ92 1463 aa14.36□□□□□ -0.11
TNC-213ENST00000544972 BCL9O00512 1426 aa14.36□□□□□ -0.11
TNC-213ENST00000544972 CCT4P50991 539 aaKnown RBP14.36□□□□□ -0.11
TNC-213ENST00000544972 HDAC1Q13547 482 aaPredicted RBP14.36□□□□□ -0.11
TNC-213ENST00000544972 MARCH10Q8NA82 808 aaPredicted RBP14.36□□□□□ -0.11
TNC-213ENST00000544972 RWDD1Q9H446 243 aaPredicted RBP14.36□□□□□ -0.11
TNC-213ENST00000544972 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
TNC-213ENST00000544972 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
TNC-213ENST00000544972 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
TNC-213ENST00000544972 HYPKQ9NX55 129 aa14.35□□□□□ -0.11
TNC-213ENST00000544972 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 MEIS3Q99687 375 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 ASAP1Q9ULH1 1129 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 ADCY9O60503 1353 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
TNC-213ENST00000544972 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
TNC-213ENST00000544972 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.11
TNC-213ENST00000544972 MEX3CQ5U5Q3 659 aaKnown RBP14.33□□□□□ -0.12
TNC-213ENST00000544972 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.12
TNC-213ENST00000544972 PRIM1P49642 420 aaKnown RBP14.32□□□□□ -0.12
TNC-213ENST00000544972 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
TNC-213ENST00000544972 AFF2P51816 1311 aa14.32□□□□□ -0.12
TNC-213ENST00000544972 THSD7AQ9UPZ6 1657 aa14.32□□□□□ -0.12
TNC-213ENST00000544972 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
TNC-213ENST00000544972 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
TNC-213ENST00000544972 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
TNC-213ENST00000544972 BEND3Q5T5X7 828 aa14.31□□□□□ -0.12
TNC-213ENST00000544972 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
TNC-213ENST00000544972 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 MYL6BP14649 208 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
TNC-213ENST00000544972 SMC5Q8IY18 1101 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
TNC-213ENST00000544972 ERBB4Q15303 1308 aa14.3□□□□□ -0.12
TNC-213ENST00000544972 COPS6Q7L5N1 327 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 ATRNO75882 1429 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
TNC-213ENST00000544972 XAGE3Q8WTP9 111 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
TNC-213ENST00000544972 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
TNC-213ENST00000544972 A1BGP04217 495 aa14.28□□□□□ -0.12
TNC-213ENST00000544972 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
TNC-213ENST00000544972 ANKRD44Q8N8A2 993 aa14.28□□□□□ -0.12
TNC-213ENST00000544972 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
TNC-213ENST00000544972 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
TNC-213ENST00000544972 DDX58O95786 925 aaKnown RBP14.27□□□□□ -0.12
TNC-213ENST00000544972 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
TNC-213ENST00000544972 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.13
TNC-213ENST00000544972 GNAI3P08754 354 aa14.27□□□□□ -0.13
TNC-213ENST00000544972 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
TNC-213ENST00000544972 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
TNC-213ENST00000544972 TEX13AQ9BXU3 409 aaPredicted RBP14.26□□□□□ -0.13
TNC-213ENST00000544972 TRPC5Q9UL62 973 aaPredicted RBP14.26□□□□□ -0.13
TNC-213ENST00000544972 KCNQ2O43526 872 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 GNAI2P04899 355 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 RGS3P49796 1198 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 TJP1Q07157 1748 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 ARFGEF2Q9Y6D5 1785 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 NBPF7P0C2Y1 421 aaPredicted RBP14.25□□□□□ -0.13
TNC-213ENST00000544972 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
TNC-213ENST00000544972 RIC3Q7Z5B4 369 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
TNC-213ENST00000544972 A0A0G2JS52 829 aa14.24□□□□□ -0.13
TNC-213ENST00000544972 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
TNC-213ENST00000544972 MYT1Q01538 1121 aa14.24□□□□□ -0.13
TNC-213ENST00000544972 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
TNC-213ENST00000544972 METTL22Q9BUU2 404 aaPredicted RBP14.24□□□□□ -0.13
TNC-213ENST00000544972 NUP188Q5SRE5 1749 aa14.23□□□□□ -0.13
TNC-213ENST00000544972 UBTFL1P0CB47 393 aaPredicted RBP14.23□□□□□ -0.13
TNC-213ENST00000544972 CYP19A1P11511 503 aaPredicted RBP14.23□□□□□ -0.13
TNC-213ENST00000544972 NUCB1Q02818 461 aa14.23□□□□□ -0.13
TNC-213ENST00000544972 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
TNC-213ENST00000544972 PLBD2Q8NHP8 589 aa14.23□□□□□ -0.13
TNC-213ENST00000544972 DCTPP1Q9H773 170 aa14.23□□□□□ -0.13
TNC-213ENST00000544972 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
TNC-213ENST00000544972 IBTKQ9P2D0 1353 aaPredicted RBP14.23□□□□□ -0.13
TNC-213ENST00000544972 STARD3NLO95772 234 aa14.22□□□□□ -0.13
TNC-213ENST00000544972 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
TNC-213ENST00000544972 CICQ96RK0 1608 aaPredicted RBP14.22□□□□□ -0.13
TNC-213ENST00000544972 PDE4AP27815 886 aa14.22□□□□□ -0.13
TNC-213ENST00000544972 UTYO14607 1347 aa14.21□□□□□ -0.13
TNC-213ENST00000544972 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
TNC-213ENST00000544972 ATP8B2P98198 1209 aa14.21□□□□□ -0.13
TNC-213ENST00000544972 MYD88Q99836 296 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms