RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
ABR-205ENST00000544583 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
ABR-205ENST00000544583 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
ABR-205ENST00000544583 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
ABR-205ENST00000544583 JARID2Q92833 1246 aaPredicted RBP17.22■□□□□ 0.35
ABR-205ENST00000544583 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
ABR-205ENST00000544583 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
ABR-205ENST00000544583 LRRC59Q96AG4 307 aaKnown RBP17.21■□□□□ 0.35
ABR-205ENST00000544583 STIM1Q13586 685 aa17.21■□□□□ 0.35
ABR-205ENST00000544583 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.21■□□□□ 0.35
ABR-205ENST00000544583 RANBP6O60518 1105 aaKnown RBP17.21■□□□□ 0.35
ABR-205ENST00000544583 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
ABR-205ENST00000544583 WDR62O43379 1518 aa17.21■□□□□ 0.35
ABR-205ENST00000544583 NUP160Q12769 1436 aa17.21■□□□□ 0.35
ABR-205ENST00000544583 ST5P78524 1137 aa17.21■□□□□ 0.34
ABR-205ENST00000544583 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.34
ABR-205ENST00000544583 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.34
ABR-205ENST00000544583 SPATA32Q96LK8 384 aa17.21■□□□□ 0.34
ABR-205ENST00000544583 IL16Q14005 1332 aa17.21■□□□□ 0.34
ABR-205ENST00000544583 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
ABR-205ENST00000544583 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
ABR-205ENST00000544583 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
ABR-205ENST00000544583 IL2RBP14784 551 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
ABR-205ENST00000544583 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 RALGAPBQ86X10 1494 aa17.2■□□□□ 0.34
ABR-205ENST00000544583 MRE11P49959 708 aa17.19■□□□□ 0.34
ABR-205ENST00000544583 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
ABR-205ENST00000544583 SYCP1Q15431 976 aa17.19■□□□□ 0.34
ABR-205ENST00000544583 MNS1Q8NEH6 495 aa17.19■□□□□ 0.34
ABR-205ENST00000544583 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
ABR-205ENST00000544583 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
ABR-205ENST00000544583 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
ABR-205ENST00000544583 ZNF213O14771 459 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 IQCA1Q86XH1 822 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 GOLIM4O00461 696 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 DACH1Q9UI36 760 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
ABR-205ENST00000544583 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
ABR-205ENST00000544583 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■■ 96.1
ABR-205ENST00000544583 GCP02774 474 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 FLT4P35916 1363 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 SERPINC1P01008 464 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 ASXL1Q8IXJ9 1541 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 CCDC192P0DO97 292 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 CCDC96Q2M329 555 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 CCDC83Q8IWF9 413 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
ABR-205ENST00000544583 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
ABR-205ENST00000544583 RNF41Q9H4P4 317 aaPredicted RBP17.16■□□□□ 0.34
ABR-205ENST00000544583 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 TBX22Q9Y458 520 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 WDHD1O75717 1129 aaPredicted RBP17.16■□□□□ 0.34
ABR-205ENST00000544583 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
ABR-205ENST00000544583 LDHCP07864 332 aa17.15■□□□□ 0.34
ABR-205ENST00000544583 CCDC82Q8N4S0 544 aa17.15■□□□□ 0.34
ABR-205ENST00000544583 NPATQ14207 1427 aa17.15■□□□□ 0.34
ABR-205ENST00000544583 CAGE1Q8TC20 777 aa17.15■□□□□ 0.34
ABR-205ENST00000544583 ABCC1P33527 1531 aa17.15■□□□□ 0.34
ABR-205ENST00000544583 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
ABR-205ENST00000544583 SLC12A7Q9Y666 1083 aa17.14■□□□□ 0.33
ABR-205ENST00000544583 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
ABR-205ENST00000544583 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
ABR-205ENST00000544583 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
ABR-205ENST00000544583 ZNHIT6Q9NWK9 470 aaKnown RBP17.14■□□□□ 0.33
ABR-205ENST00000544583 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
ABR-205ENST00000544583 PAXIP1Q6ZW49 1069 aaPredicted RBP17.13■□□□□ 0.33
ABR-205ENST00000544583 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
ABR-205ENST00000544583 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
ABR-205ENST00000544583 BAG3O95817 575 aa17.13■□□□□ 0.33
ABR-205ENST00000544583 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
ABR-205ENST00000544583 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
ABR-205ENST00000544583 WDR78Q5VTH9 848 aa17.13■□□□□ 0.33
ABR-205ENST00000544583 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
ABR-205ENST00000544583 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
ABR-205ENST00000544583 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABR-205ENST00000544583 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
ABR-205ENST00000544583 TRPM2O94759 1503 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 SIRT1Q96EB6 747 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 RUFY1Q96T51 708 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 TNIP1Q15025 636 aa17.12■□□□□ 0.33
ABR-205ENST00000544583 ATP10AO60312 1499 aa17.11■□□□□ 0.33
ABR-205ENST00000544583 SKAP1Q86WV1 359 aa17.11■□□□□ 0.33
ABR-205ENST00000544583 PAF1Q8N7H5 531 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms