RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
C2CD3-220ENST00000544293 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
C2CD3-220ENST00000544293 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
C2CD3-220ENST00000544293 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
C2CD3-220ENST00000544293 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
C2CD3-220ENST00000544293 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
C2CD3-220ENST00000544293 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
C2CD3-220ENST00000544293 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
C2CD3-220ENST00000544293 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
C2CD3-220ENST00000544293 LMNB1P20700 586 aa13.07□□□□□ -0.32
C2CD3-220ENST00000544293 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
C2CD3-220ENST00000544293 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
C2CD3-220ENST00000544293 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
C2CD3-220ENST00000544293 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
C2CD3-220ENST00000544293 SERPINB2P05120 415 aa13.06□□□□□ -0.32
C2CD3-220ENST00000544293 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
C2CD3-220ENST00000544293 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
C2CD3-220ENST00000544293 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
C2CD3-220ENST00000544293 ZPR1O75312 459 aa13.05□□□□□ -0.32
C2CD3-220ENST00000544293 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
C2CD3-220ENST00000544293 CARMIL3Q8ND23 1372 aa13.05□□□□□ -0.32
C2CD3-220ENST00000544293 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
C2CD3-220ENST00000544293 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
C2CD3-220ENST00000544293 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
C2CD3-220ENST00000544293 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
C2CD3-220ENST00000544293 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
C2CD3-220ENST00000544293 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
C2CD3-220ENST00000544293 POLR3GLQ9BT43 218 aa13.03□□□□□ -0.32
C2CD3-220ENST00000544293 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.33
C2CD3-220ENST00000544293 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
C2CD3-220ENST00000544293 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
C2CD3-220ENST00000544293 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
C2CD3-220ENST00000544293 COL15A1P39059 1388 aa13.01□□□□□ -0.33
C2CD3-220ENST00000544293 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
C2CD3-220ENST00000544293 TJP1Q07157 1748 aa13□□□□□ -0.33
C2CD3-220ENST00000544293 H0YIN7 160 aa13□□□□□ -0.33
C2CD3-220ENST00000544293 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
C2CD3-220ENST00000544293 BICDL1Q6ZP65 573 aa13□□□□□ -0.33
C2CD3-220ENST00000544293 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
C2CD3-220ENST00000544293 C21orf2O43822 256 aa12.99□□□□□ -0.33
C2CD3-220ENST00000544293 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
C2CD3-220ENST00000544293 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
C2CD3-220ENST00000544293 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
C2CD3-220ENST00000544293 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
C2CD3-220ENST00000544293 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
C2CD3-220ENST00000544293 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
C2CD3-220ENST00000544293 HMOX1P09601 288 aa12.98□□□□□ -0.33
C2CD3-220ENST00000544293 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
C2CD3-220ENST00000544293 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
C2CD3-220ENST00000544293 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
C2CD3-220ENST00000544293 SBF1O95248 1867 aa12.97□□□□□ -0.33
C2CD3-220ENST00000544293 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
C2CD3-220ENST00000544293 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
C2CD3-220ENST00000544293 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
C2CD3-220ENST00000544293 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
C2CD3-220ENST00000544293 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
C2CD3-220ENST00000544293 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
C2CD3-220ENST00000544293 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
C2CD3-220ENST00000544293 PASKQ96RG2 1323 aa12.96□□□□□ -0.33
C2CD3-220ENST00000544293 FOXN1O15353 648 aa12.96□□□□□ -0.33
C2CD3-220ENST00000544293 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
C2CD3-220ENST00000544293 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
C2CD3-220ENST00000544293 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.33
C2CD3-220ENST00000544293 MRC1P22897 1456 aa12.96□□□□□ -0.34
C2CD3-220ENST00000544293 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.34
C2CD3-220ENST00000544293 LTBP3Q9NS15 1303 aa12.95□□□□□ -0.34
C2CD3-220ENST00000544293 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
C2CD3-220ENST00000544293 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
C2CD3-220ENST00000544293 KCNQ3O43525 872 aa12.94□□□□□ -0.34
C2CD3-220ENST00000544293 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
C2CD3-220ENST00000544293 A1BGP04217 495 aa12.94□□□□□ -0.34
C2CD3-220ENST00000544293 TNRC6CQ9HCJ0 1690 aaKnown RBP12.93□□□□□ -0.34
C2CD3-220ENST00000544293 SRGNP10124 158 aa12.93□□□□□ -0.34
C2CD3-220ENST00000544293 PDE6BP35913 854 aa12.93□□□□□ -0.34
C2CD3-220ENST00000544293 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
C2CD3-220ENST00000544293 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
C2CD3-220ENST00000544293 CNTNAP1P78357 1384 aa12.93□□□□□ -0.34
C2CD3-220ENST00000544293 A0A087WZG4 1122 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 STARD3NLO95772 234 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 VEGFBP49765 207 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-220ENST00000544293 TAOK3Q9H2K8 898 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-220ENST00000544293 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
C2CD3-220ENST00000544293 ZBTB22O15209 634 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
C2CD3-220ENST00000544293 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
C2CD3-220ENST00000544293 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
C2CD3-220ENST00000544293 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
C2CD3-220ENST00000544293 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
C2CD3-220ENST00000544293 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
C2CD3-220ENST00000544293 CNKSR1Q969H4 720 aa12.9□□□□□ -0.34
C2CD3-220ENST00000544293 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
C2CD3-220ENST00000544293 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms