RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
PRAME-214ENST00000543184 TSC1Q92574 1164 aa17.33■□□□□ 0.36
PRAME-214ENST00000543184 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
PRAME-214ENST00000543184 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.36
PRAME-214ENST00000543184 TNS3Q68CZ2 1445 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 RTL1A6NKG5 1358 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 GADD45BO75293 160 aaPredicted RBP17.32■□□□□ 0.36
PRAME-214ENST00000543184 CASC1Q6TDU7 716 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 KIF20BQ96Q89 1820 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 ERC2O15083 957 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
PRAME-214ENST00000543184 KIAA0232Q92628 1395 aa17.31■□□□□ 0.36
PRAME-214ENST00000543184 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
PRAME-214ENST00000543184 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
PRAME-214ENST00000543184 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
PRAME-214ENST00000543184 LRSAM1Q6UWE0 723 aa17.31■□□□□ 0.36
PRAME-214ENST00000543184 PDLIM2Q96JY6 352 aa17.31■□□□□ 0.36
PRAME-214ENST00000543184 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
PRAME-214ENST00000543184 HOXC9P31274 260 aa17.3■□□□□ 0.36
PRAME-214ENST00000543184 PDE1AP54750 535 aa17.3■□□□□ 0.36
PRAME-214ENST00000543184 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
PRAME-214ENST00000543184 RGS12O14924 1447 aa17.3■□□□□ 0.36
PRAME-214ENST00000543184 ANO2Q9NQ90 1003 aa17.3■□□□□ 0.36
PRAME-214ENST00000543184 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
PRAME-214ENST00000543184 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
PRAME-214ENST00000543184 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
PRAME-214ENST00000543184 IL25Q9H293 177 aa17.29■□□□□ 0.36
PRAME-214ENST00000543184 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
PRAME-214ENST00000543184 REC8O95072 547 aa17.29■□□□□ 0.36
PRAME-214ENST00000543184 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
PRAME-214ENST00000543184 ZKSCAN5Q9Y2L8 839 aa17.29■□□□□ 0.36
PRAME-214ENST00000543184 EP400Q96L91 3159 aa17.28■□□□□ 0.36
PRAME-214ENST00000543184 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
PRAME-214ENST00000543184 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
PRAME-214ENST00000543184 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.36
PRAME-214ENST00000543184 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
PRAME-214ENST00000543184 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
PRAME-214ENST00000543184 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
PRAME-214ENST00000543184 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
PRAME-214ENST00000543184 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
PRAME-214ENST00000543184 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
PRAME-214ENST00000543184 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
PRAME-214ENST00000543184 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
PRAME-214ENST00000543184 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
PRAME-214ENST00000543184 CHL1O00533 1208 aa17.25■□□□□ 0.35
PRAME-214ENST00000543184 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
PRAME-214ENST00000543184 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 C8orf37Q96NL8 207 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 EYA1Q99502 592 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 TCHHQ07283 1943 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 ESYT1Q9BSJ8 1104 aa17.24■□□□□ 0.35
PRAME-214ENST00000543184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.24■□□□□ 0.352e-9■□□□□ 9.9
PRAME-214ENST00000543184 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
PRAME-214ENST00000543184 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
PRAME-214ENST00000543184 ANKRD24Q8TF21 1146 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 ARHGEF10O15013 1369 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 BRD1O95696 1058 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 FLT4P35916 1363 aa17.23■□□□□ 0.35
PRAME-214ENST00000543184 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
PRAME-214ENST00000543184 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
PRAME-214ENST00000543184 CPA1P15085 419 aa17.22■□□□□ 0.35
PRAME-214ENST00000543184 IP6K1Q92551 441 aa17.22■□□□□ 0.35
PRAME-214ENST00000543184 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
PRAME-214ENST00000543184 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
PRAME-214ENST00000543184 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
PRAME-214ENST00000543184 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
PRAME-214ENST00000543184 MX1P20591 662 aa17.2■□□□□ 0.34
PRAME-214ENST00000543184 CHMLP26374 656 aa17.2■□□□□ 0.34
PRAME-214ENST00000543184 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
PRAME-214ENST00000543184 CNPY2Q9Y2B0 182 aa17.2■□□□□ 0.34
PRAME-214ENST00000543184 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
PRAME-214ENST00000543184 HMMRO75330 724 aa17.19■□□□□ 0.34
PRAME-214ENST00000543184 EVA1CP58658 441 aa17.19■□□□□ 0.34
PRAME-214ENST00000543184 HS1BP3Q53T59 392 aa17.19■□□□□ 0.34
PRAME-214ENST00000543184 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
PRAME-214ENST00000543184 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
PRAME-214ENST00000543184 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
PRAME-214ENST00000543184 CDK12Q9NYV4 1490 aaPredicted RBP17.19■□□□□ 0.34
PRAME-214ENST00000543184 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
PRAME-214ENST00000543184 LRRCC1Q9C099 1032 aa17.18■□□□□ 0.34
PRAME-214ENST00000543184 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
PRAME-214ENST00000543184 NFAT5O94916 1531 aa17.18■□□□□ 0.34
PRAME-214ENST00000543184 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
PRAME-214ENST00000543184 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
PRAME-214ENST00000543184 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
PRAME-214ENST00000543184 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
PRAME-214ENST00000543184 GNAI2P04899 355 aa17.17■□□□□ 0.34
PRAME-214ENST00000543184 MBD3O95983 291 aa17.17■□□□□ 0.34
PRAME-214ENST00000543184 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
PRAME-214ENST00000543184 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
PRAME-214ENST00000543184 PTPRCP08575 1304 aa17.16■□□□□ 0.34
PRAME-214ENST00000543184 ERBB3P21860 1342 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms