RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 NFIXQ14938 502 aa16.54■□□□□ 0.24
COPS7A-213ENST00000542150 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
COPS7A-213ENST00000542150 SCN11AQ9UI33 1791 aa16.54■□□□□ 0.24
COPS7A-213ENST00000542150 ZPR1O75312 459 aa16.53■□□□□ 0.24
COPS7A-213ENST00000542150 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
COPS7A-213ENST00000542150 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.24
COPS7A-213ENST00000542150 RNF181Q9P0P0 153 aa16.52■□□□□ 0.24
COPS7A-213ENST00000542150 PRELPP51888 382 aa16.51■□□□□ 0.23
COPS7A-213ENST00000542150 COL15A1P39059 1388 aa16.51■□□□□ 0.23
COPS7A-213ENST00000542150 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
COPS7A-213ENST00000542150 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
COPS7A-213ENST00000542150 FSTL1Q12841 308 aa16.5■□□□□ 0.23
COPS7A-213ENST00000542150 KDM2BQ8NHM5 1336 aa16.49■□□□□ 0.23
COPS7A-213ENST00000542150 SERPINB2P05120 415 aa16.49■□□□□ 0.23
COPS7A-213ENST00000542150 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
COPS7A-213ENST00000542150 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
COPS7A-213ENST00000542150 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-213ENST00000542150 NRXN2Q9P2S2 1712 aa16.48■□□□□ 0.23
COPS7A-213ENST00000542150 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
COPS7A-213ENST00000542150 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-213ENST00000542150 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
COPS7A-213ENST00000542150 HTRA3P83110 453 aa16.46■□□□□ 0.23
COPS7A-213ENST00000542150 RASSF7Q02833 373 aa16.46■□□□□ 0.23
COPS7A-213ENST00000542150 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
COPS7A-213ENST00000542150 JMYQ8N9B5 988 aa16.46■□□□□ 0.23
COPS7A-213ENST00000542150 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.23
COPS7A-213ENST00000542150 CARMIL3Q8ND23 1372 aa16.46■□□□□ 0.23
COPS7A-213ENST00000542150 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
COPS7A-213ENST00000542150 NFKBIEO00221 500 aa16.45■□□□□ 0.22
COPS7A-213ENST00000542150 STARD3NLO95772 234 aa16.45■□□□□ 0.22
COPS7A-213ENST00000542150 LMNB1P20700 586 aa16.45■□□□□ 0.22
COPS7A-213ENST00000542150 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
COPS7A-213ENST00000542150 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
COPS7A-213ENST00000542150 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
COPS7A-213ENST00000542150 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
COPS7A-213ENST00000542150 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
COPS7A-213ENST00000542150 HEG1Q9ULI3 1381 aa16.43■□□□□ 0.22
COPS7A-213ENST00000542150 A0A087WZG4 1122 aa16.43■□□□□ 0.22
COPS7A-213ENST00000542150 GLTPD2A6NH11 291 aa16.43■□□□□ 0.22
COPS7A-213ENST00000542150 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
COPS7A-213ENST00000542150 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
COPS7A-213ENST00000542150 SBF1O95248 1867 aa16.42■□□□□ 0.22
COPS7A-213ENST00000542150 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
COPS7A-213ENST00000542150 H0YIN7 160 aa16.42■□□□□ 0.22
COPS7A-213ENST00000542150 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
COPS7A-213ENST00000542150 GAS2L2Q8NHY3 880 aa16.42■□□□□ 0.22
COPS7A-213ENST00000542150 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
COPS7A-213ENST00000542150 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
COPS7A-213ENST00000542150 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
COPS7A-213ENST00000542150 POTECB2RU33 542 aa16.41■□□□□ 0.22
COPS7A-213ENST00000542150 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
COPS7A-213ENST00000542150 BICDL1Q6ZP65 573 aa16.41■□□□□ 0.22
COPS7A-213ENST00000542150 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
COPS7A-213ENST00000542150 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
COPS7A-213ENST00000542150 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
COPS7A-213ENST00000542150 TEFQ10587 303 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 PCNTO95613 3336 aa16.4■□□□□ 0.22
COPS7A-213ENST00000542150 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
COPS7A-213ENST00000542150 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
COPS7A-213ENST00000542150 KCNQ3O43525 872 aa16.39■□□□□ 0.21
COPS7A-213ENST00000542150 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
COPS7A-213ENST00000542150 A1BGP04217 495 aa16.39■□□□□ 0.21
COPS7A-213ENST00000542150 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
COPS7A-213ENST00000542150 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
COPS7A-213ENST00000542150 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
COPS7A-213ENST00000542150 PDE6BP35913 854 aa16.37■□□□□ 0.21
COPS7A-213ENST00000542150 CCDC24Q8N4L8 307 aa16.37■□□□□ 0.21
COPS7A-213ENST00000542150 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
COPS7A-213ENST00000542150 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
COPS7A-213ENST00000542150 C21orf2O43822 256 aa16.35■□□□□ 0.21
COPS7A-213ENST00000542150 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
COPS7A-213ENST00000542150 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
COPS7A-213ENST00000542150 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-213ENST00000542150 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
COPS7A-213ENST00000542150 ANKRD31Q8N7Z5 1873 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 SRGNP10124 158 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-213ENST00000542150 SETDB2Q96T68 719 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
COPS7A-213ENST00000542150 PRAMEF22A3QJZ6 481 aa16.33■□□□□ 0.2
COPS7A-213ENST00000542150 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
COPS7A-213ENST00000542150 C7orf43Q8WVR3 580 aa16.33■□□□□ 0.2
COPS7A-213ENST00000542150 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-213ENST00000542150 ERFEQ4G0M1 354 aa16.32■□□□□ 0.2
COPS7A-213ENST00000542150 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
COPS7A-213ENST00000542150 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
COPS7A-213ENST00000542150 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
COPS7A-213ENST00000542150 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-213ENST00000542150 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
COPS7A-213ENST00000542150 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-213ENST00000542150 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
COPS7A-213ENST00000542150 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
COPS7A-213ENST00000542150 COL11A2P13942 1736 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-213ENST00000542150 RGL2O15211 777 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms