RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 POLA2Q14181 598 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 GPT2Q8TD30 523 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.2□□□□□ -1.1
NKRF-204ENST00000542113 TTC41PQ6P2S7 1318 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 RAD50Q92878 1312 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 USP44Q9H0E7 712 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 TSPY26PQ9H489 355 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 KIF13AQ9H1H9 1805 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 ZNF500O60304 480 aaPredicted RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 SURF6O75683 361 aaKnown RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 PRIM1P49642 420 aaKnown RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 HSP90AA2PQ14568 343 aaPredicted RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 NWD1Q149M9 1564 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 GLRX3O76003 335 aaKnown RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 CEMIPQ8WUJ3 1361 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 NCAPD2Q15021 1401 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 USP42Q9H9J4 1324 aaKnown RBP8.19□□□□□ -1.1
NKRF-204ENST00000542113 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 ABTB2Q8N961 1025 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 IL17REQ8NFR9 667 aa8.19□□□□□ -1.1
NKRF-204ENST00000542113 OVOS2A0A0G2JMS6 1433 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 SYCE3A1L190 88 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 SGSM2O43147 1006 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 PPP1R42Q7Z4L9 355 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 DNAAF4Q8WXU2 420 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
NKRF-204ENST00000542113 HIP1O00291 1037 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 KCNH5Q8NCM2 988 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 ZKSCAN5Q9Y2L8 839 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 ALDH1L1O75891 902 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 OS9Q13438 667 aaPredicted RBP8.18□□□□□ -1.1
NKRF-204ENST00000542113 TSHZ3Q63HK5 1081 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 IP6K1Q92551 441 aa8.18□□□□□ -1.1
NKRF-204ENST00000542113 ZSCAN31Q96LW9 406 aaPredicted RBP8.18□□□□□ -1.1
NKRF-204ENST00000542113 TEFQ10587 303 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 MTX1Q13505 466 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 AMOTQ4VCS5 1084 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 CLASRPQ8N2M8 674 aaKnown RBP8.17□□□□□ -1.1
NKRF-204ENST00000542113 SH2B1Q9NRF2 756 aaPredicted RBP8.17□□□□□ -1.1
NKRF-204ENST00000542113 DIAPH3Q9NSV4 1193 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
NKRF-204ENST00000542113 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 MAP7D2Q96T17 732 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
NKRF-204ENST00000542113 PTMAP06454 111 aaKnown RBP8.16□□□□□ -1.1
NKRF-204ENST00000542113 EIF4A1P60842 406 aaKnown RBP8.16□□□□□ -1.1
NKRF-204ENST00000542113 PLEKHO1Q53GL0 409 aaPredicted RBP8.16□□□□□ -1.1
NKRF-204ENST00000542113 CCDC183Q5T5S1 534 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 PI4K2BQ8TCG2 481 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
NKRF-204ENST00000542113 SMC3Q9UQE7 1217 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 TM6SF1Q9BZW5 370 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
NKRF-204ENST00000542113 BEND3Q5T5X7 828 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 NUTM1Q86Y26 1132 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 PHF8Q9UPP1 1060 aa8.16□□□□□ -1.1
NKRF-204ENST00000542113 ZSCAN22P10073 491 aaPredicted RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 ZKSCAN1P17029 563 aaPredicted RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 UBE2HP62256 183 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 FOXD4L5Q5VV16 416 aaPredicted RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 NOL8Q76FK4 1167 aaKnown RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 MTERF4Q7Z6M4 381 aaKnown RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 LTV1Q96GA3 475 aaPredicted RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 LSG1Q9H089 658 aaKnown RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 SNX14Q9Y5W7 946 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 DDX58O95786 925 aaKnown RBP8.15□□□□□ -1.1
NKRF-204ENST00000542113 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 UNC5CLQ8IV45 518 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 ECHDC1Q9NTX5 307 aa8.15□□□□□ -1.1
NKRF-204ENST00000542113 LMTK3Q96Q04 1460 aa8.15□□□□□ -1.11
NKRF-204ENST00000542113 PHRF1Q9P1Y6 1649 aaKnown RBP8.15□□□□□ -1.11
NKRF-204ENST00000542113 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.11
NKRF-204ENST00000542113 CRYBG1Q9Y4K1 1723 aa8.15□□□□□ -1.11
NKRF-204ENST00000542113 STX6O43752 255 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 IFIT2P09913 472 aaKnown RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 EIF2S2P20042 333 aaKnown RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 C1orf141Q5JVX7 400 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 VPS53Q5VIR6 699 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 EVI5LQ96CN4 794 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 TTC14Q96N46 770 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 RGPD8O14715 1765 aaPredicted RBP8.14□□□□□ -1.11
NKRF-204ENST00000542113 PI4KAP2A4QPH2 592 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 PSMA5P28066 241 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 PI4KAP1Q8N8J0 262 aa8.14□□□□□ -1.11
NKRF-204ENST00000542113 C9orf78Q9NZ63 289 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms