RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NOL8Q76FK4 1167 aaKnown RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC125Q86Z20 511 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 RBM12BQ8IXT5 1001 aaKnown RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 PROCA1Q8NCQ7 364 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC191Q8NCU4 936 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC26Q8TAB7 109 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 SNX21Q969T3 373 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 AGAP3Q96P47 875 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 KIF2CQ99661 725 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 CRACR2AQ9BSW2 395 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 MMTAG2Q9BU76 263 aaKnown RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 HOMER3Q9NSC5 361 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 IRAK4Q9NWZ3 460 aa6.13□□□□□ -1.43
SNHG1-218ENST00000541615 RRP15Q9Y3B9 282 aaKnown RBP6.13□□□□□ -1.43
SNHG1-218ENST00000541615 A0A1B0GUA9 196 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 RPS6KA5O75582 802 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 TUBB4AP04350 444 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 VDRP11473 427 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 TNNT1P13805 278 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 GCFC2P16383 781 aaKnown RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 SSFA2P28290 1259 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 FOSBP53539 338 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 SFSWAPQ12872 951 aaKnown RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 SLC5A9Q2M3M2 681 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 MYOM3Q5VTT5 1437 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 MORC1Q86VD1 984 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 SMC5Q8IY18 1101 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 CACTIN-AS1Q8N1I8 211 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 NME8Q8N427 588 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 OGFOD1Q8N543 542 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 NBPF15Q8N660 670 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 ZNF454Q8N9F8 522 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 DRAXINQ8NBI3 349 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 C17orf50Q8WW18 174 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 NECTIN2Q92692 538 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 UPF1Q92900 1129 aaKnown RBP eCLIP6.12□□□□□ -1.431e-26■□□□□ 8.6
SNHG1-218ENST00000541615 EXOC4Q96A65 974 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 KCTD12Q96CX2 325 aaKnown RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 LZTS2Q9BRK4 669 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 POLR3CQ9BUI4 534 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 TRIM6Q9C030 488 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 GOPCQ9HD26 462 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 ATG3Q9NT62 314 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 ARGLU1Q9NWB6 273 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-218ENST00000541615 YEATS2Q9ULM3 1422 aa6.12□□□□□ -1.43
SNHG1-218ENST00000541615 MIA2Q96PC5 1412 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 PLEKHH1Q9ULM0 1364 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 NCKAP5LQ9HCH0 1330 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 A0A087WUV0 522 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-218ENST00000541615 KIF5CO60282 957 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 ERLIN1O75477 346 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-218ENST00000541615 EIF5P55010 431 aaKnown RBP6.11□□□□□ -1.43
SNHG1-218ENST00000541615 PDIA5Q14554 519 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 RASA3Q14644 834 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 GBP6Q6ZN66 633 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 TRIM74Q86UV6 250 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 SAMD3Q8N6K7 520 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 RNF214Q8ND24 703 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 ZNF396Q96N95 335 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-218ENST00000541615 MAF1Q9H063 256 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 INCENPQ9NQS7 918 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 GNL3LQ9NVN8 582 aaKnown RBP6.11□□□□□ -1.43
SNHG1-218ENST00000541615 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
SNHG1-218ENST00000541615 MAPKBP1O60336 1514 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 ZMYM4Q5VZL5 1548 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC88BA6NC98 1476 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 NCOA3Q9Y6Q9 1424 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 KDRP35968 1356 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 TONSLQ96HA7 1378 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 USP19O94966 1318 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 GOLGA6L10A6NI86 522 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 EXOC5O00471 708 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 CAND2O75155 1236 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 NEBLO76041 1014 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 SNUPNO95149 360 aaKnown RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 MBD3O95983 291 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 NBPF7P0C2Y1 421 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 PTPREP23469 700 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 SESN3P58005 492 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 CCT2P78371 535 aaKnown RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 NCBP1Q09161 790 aaKnown RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 LRSAM1Q6UWE0 723 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 CCDC112Q8NEF3 446 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 BHMTQ93088 406 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 JPH4Q96JJ6 628 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 JADE2Q9NQC1 790 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 MAGEC2Q9UBF1 373 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
SNHG1-218ENST00000541615 LRRFIP2Q9Y608 721 aaKnown RBP6.1□□□□□ -1.43
SNHG1-218ENST00000541615 SETD5Q9C0A6 1442 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 BHMG1C9JSJ3 638 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-218ENST00000541615 GOLGA6L19H0YKK7 550 aa6.09□□□□□ -1.43
SNHG1-218ENST00000541615 SMAPO00193 183 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms