RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZBTB40Q9NUA8 1239 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 KAT6BQ8WYB5 2073 aa10.97□□□□□ -0.65
THBS3-210ENST00000541576 TOGARAM1Q9Y4F4 1720 aa10.97□□□□□ -0.65
THBS3-210ENST00000541576 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 SNRPA1P09661 255 aaKnown RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 CENPQQ7L2Z9 268 aaPredicted RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 DBF4Q9UBU7 674 aaPredicted RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 INTS3Q68E01 1043 aaKnown RBP10.97□□□□□ -0.65
THBS3-210ENST00000541576 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.66
THBS3-210ENST00000541576 PHAXQ9H814 394 aaKnown RBP10.96□□□□□ -0.66
THBS3-210ENST00000541576 F6X3S4 739 aa10.96□□□□□ -0.66
THBS3-210ENST00000541576 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.95□□□□□ -0.66
THBS3-210ENST00000541576 ANXA1P04083 346 aa10.95□□□□□ -0.66
THBS3-210ENST00000541576 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
THBS3-210ENST00000541576 C5P01031 1676 aa10.95□□□□□ -0.66
THBS3-210ENST00000541576 PIGBQ92521 554 aa10.95□□□□□ -0.66
THBS3-210ENST00000541576 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 CCT4P50991 539 aaKnown RBP10.94□□□□□ -0.66
THBS3-210ENST00000541576 DDX21Q9NR30 783 aaKnown RBP eCLIP10.94□□□□□ -0.66
THBS3-210ENST00000541576 AFF2P51816 1311 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 MARCH10Q8NA82 808 aaPredicted RBP10.94□□□□□ -0.66
THBS3-210ENST00000541576 HYPKQ9NX55 129 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 UBR2Q8IWV8 1755 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 ITGB4P16144 1822 aa10.94□□□□□ -0.66
THBS3-210ENST00000541576 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
THBS3-210ENST00000541576 SYTL4Q96C24 671 aaPredicted RBP10.94□□□□□ -0.66
THBS3-210ENST00000541576 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
THBS3-210ENST00000541576 BCL9O00512 1426 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 GLI3P10071 1580 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 A0A0G2JS52 829 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 PDIA6Q15084 440 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
THBS3-210ENST00000541576 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
THBS3-210ENST00000541576 ASAP1Q9ULH1 1129 aa10.92□□□□□ -0.66
THBS3-210ENST00000541576 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
THBS3-210ENST00000541576 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
THBS3-210ENST00000541576 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
THBS3-210ENST00000541576 PI4KAP1Q8N8J0 262 aa10.92□□□□□ -0.66
THBS3-210ENST00000541576 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
THBS3-210ENST00000541576 LAMB4A4D0S4 1761 aa10.91□□□□□ -0.66
THBS3-210ENST00000541576 MYL6BP14649 208 aa10.91□□□□□ -0.66
THBS3-210ENST00000541576 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
THBS3-210ENST00000541576 GJD4Q96KN9 370 aaPredicted RBP10.91□□□□□ -0.66
THBS3-210ENST00000541576 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
THBS3-210ENST00000541576 TRPC5Q9UL62 973 aaPredicted RBP10.91□□□□□ -0.66
THBS3-210ENST00000541576 ERBB4Q15303 1308 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 DDX58O95786 925 aaKnown RBP10.9□□□□□ -0.66
THBS3-210ENST00000541576 SIRT2Q8IXJ6 389 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 ACSBG1Q96GR2 724 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 IPO9Q96P70 1041 aaKnown RBP10.9□□□□□ -0.66
THBS3-210ENST00000541576 MEIS3Q99687 375 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 ADCY9O60503 1353 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 ATRNO75882 1429 aa10.9□□□□□ -0.66
THBS3-210ENST00000541576 AIMP1Q12904 312 aaKnown RBP10.9□□□□□ -0.67
THBS3-210ENST00000541576 KSR2Q6VAB6 950 aa10.9□□□□□ -0.67
THBS3-210ENST00000541576 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.67
THBS3-210ENST00000541576 BRPF3Q9ULD4 1205 aa10.9□□□□□ -0.67
THBS3-210ENST00000541576 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
THBS3-210ENST00000541576 SRCIN1Q9C0H9 1055 aa10.89□□□□□ -0.67
THBS3-210ENST00000541576 N4BP2Q86UW6 1770 aaPredicted RBP10.89□□□□□ -0.67
THBS3-210ENST00000541576 XAGE3Q8WTP9 111 aa10.89□□□□□ -0.67
THBS3-210ENST00000541576 TEX13AQ9BXU3 409 aaPredicted RBP10.89□□□□□ -0.67
THBS3-210ENST00000541576 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
THBS3-210ENST00000541576 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
THBS3-210ENST00000541576 COPS6Q7L5N1 327 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 LRP10Q7Z4F1 713 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 ATP10DQ9P241 1426 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 BEND3Q5T5X7 828 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 GNAI3P08754 354 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 PDZRN3Q9UPQ7 1066 aa10.88□□□□□ -0.67
THBS3-210ENST00000541576 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 A1BGP04217 495 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 RGS3P49796 1198 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 NBPF10Q6P3W6 841 aaKnown RBP10.87□□□□□ -0.67
THBS3-210ENST00000541576 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 QTRT2Q9H974 415 aaKnown RBP10.87□□□□□ -0.67
THBS3-210ENST00000541576 STARD3NLO95772 234 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 SMC5Q8IY18 1101 aa10.87□□□□□ -0.67
THBS3-210ENST00000541576 ONECUT3O60422 494 aaPredicted RBP10.86□□□□□ -0.67
THBS3-210ENST00000541576 GNAI2P04899 355 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 RPAP2Q8IXW5 612 aaPredicted RBP10.86□□□□□ -0.67
THBS3-210ENST00000541576 ARXQ96QS3 562 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 USP44Q9H0E7 712 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 KCNQ2O43526 872 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 ANKRD44Q8N8A2 993 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 SLC4A9Q96Q91 983 aa10.86□□□□□ -0.67
THBS3-210ENST00000541576 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
THBS3-210ENST00000541576 UBTFL1P0CB47 393 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms