RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PAPPAQ13219 1627 aa30.96■■■□□ 2.55
TTC3-225ENST00000540756 CCT4P50991 539 aaKnown RBP30.96■■■□□ 2.55
TTC3-225ENST00000540756 PIGBQ92521 554 aa30.96■■■□□ 2.55
TTC3-225ENST00000540756 CHMP4BQ9H444 224 aaKnown RBP30.96■■■□□ 2.55
TTC3-225ENST00000540756 PTCD1O75127 700 aaKnown RBP30.95■■■□□ 2.55
TTC3-225ENST00000540756 KCPQ6ZWJ8 1503 aa30.95■■■□□ 2.54
TTC3-225ENST00000540756 PI4KAP2A4QPH2 592 aa30.95■■■□□ 2.54
TTC3-225ENST00000540756 PI4KAP1Q8N8J0 262 aa30.95■■■□□ 2.54
TTC3-225ENST00000540756 DDB1Q16531 1140 aa30.94■■■□□ 2.54
TTC3-225ENST00000540756 MYL6BP14649 208 aa30.93■■■□□ 2.54
TTC3-225ENST00000540756 RGS3P49796 1198 aa30.93■■■□□ 2.54
TTC3-225ENST00000540756 FNBP4Q8N3X1 1017 aaPredicted RBP30.93■■■□□ 2.54
TTC3-225ENST00000540756 DDX21Q9NR30 783 aaKnown RBP eCLIP30.93■■■□□ 2.54
TTC3-225ENST00000540756 ADCY9O60503 1353 aa30.93■■■□□ 2.54
TTC3-225ENST00000540756 CDCA7Q9BWT1 371 aaPredicted RBP30.93■■■□□ 2.54
TTC3-225ENST00000540756 ASAP1Q9ULH1 1129 aa30.93■■■□□ 2.54
TTC3-225ENST00000540756 BARGINQ6ZT62 677 aa30.91■■■□□ 2.54
TTC3-225ENST00000540756 FAM98CQ17RN3 349 aaKnown RBP30.91■■■□□ 2.54
TTC3-225ENST00000540756 AIMP1Q12904 312 aaKnown RBP30.9■■■□□ 2.54
TTC3-225ENST00000540756 HYPKQ9NX55 129 aa30.9■■■□□ 2.54
TTC3-225ENST00000540756 PDZRN3Q9UPQ7 1066 aa30.9■■■□□ 2.54
TTC3-225ENST00000540756 MARCH10Q8NA82 808 aaPredicted RBP30.9■■■□□ 2.54
TTC3-225ENST00000540756 N4BP2Q86UW6 1770 aaPredicted RBP30.89■■■□□ 2.54
TTC3-225ENST00000540756 VPS72Q15906 364 aa30.89■■■□□ 2.54
TTC3-225ENST00000540756 DNAAF4Q8WXU2 420 aa30.88■■■□□ 2.53
TTC3-225ENST00000540756 SYTL4Q96C24 671 aaPredicted RBP30.88■■■□□ 2.53
TTC3-225ENST00000540756 USP21Q9UK80 565 aa30.88■■■□□ 2.53
TTC3-225ENST00000540756 ATP10DQ9P241 1426 aa30.88■■■□□ 2.53
TTC3-225ENST00000540756 PXDNLA1KZ92 1463 aa30.88■■■□□ 2.53
TTC3-225ENST00000540756 LRP10Q7Z4F1 713 aa30.87■■■□□ 2.53
TTC3-225ENST00000540756 ATG3Q9NT62 314 aa30.87■■■□□ 2.53
TTC3-225ENST00000540756 MAP3K2Q9Y2U5 619 aa30.87■■■□□ 2.53
TTC3-225ENST00000540756 LAMB4A4D0S4 1761 aa30.87■■■□□ 2.53
TTC3-225ENST00000540756 DOT1LQ8TEK3 1739 aa30.86■■■□□ 2.53
TTC3-225ENST00000540756 PRIM1P49642 420 aaKnown RBP30.86■■■□□ 2.53
TTC3-225ENST00000540756 SMC5Q8IY18 1101 aa30.86■■■□□ 2.53
TTC3-225ENST00000540756 BCL9O00512 1426 aa30.85■■■□□ 2.53
TTC3-225ENST00000540756 BEND3Q5T5X7 828 aa30.85■■■□□ 2.53
TTC3-225ENST00000540756 MEX3CQ5U5Q3 659 aaKnown RBP30.85■■■□□ 2.53
TTC3-225ENST00000540756 USP44Q9H0E7 712 aa30.85■■■□□ 2.53
TTC3-225ENST00000540756 CEP85Q6P2H3 762 aa30.84■■■□□ 2.53
TTC3-225ENST00000540756 KSR2Q6VAB6 950 aa30.84■■■□□ 2.53
TTC3-225ENST00000540756 XAGE3Q8WTP9 111 aa30.84■■■□□ 2.53
TTC3-225ENST00000540756 COPS6Q7L5N1 327 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 SRCIN1Q9C0H9 1055 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 NBPF26B4DH59 902 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 NBPF14Q5TI25 921 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 NBPF10Q6P3W6 841 aaKnown RBP30.83■■■□□ 2.53
TTC3-225ENST00000540756 NBPF15Q8N660 670 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 ACSBG1Q96GR2 724 aa30.83■■■□□ 2.53
TTC3-225ENST00000540756 A1BGP04217 495 aa30.81■■■□□ 2.52
TTC3-225ENST00000540756 ANKRD44Q8N8A2 993 aa30.81■■■□□ 2.52
TTC3-225ENST00000540756 RBM19Q9Y4C8 960 aaKnown RBP30.8■■■□□ 2.52
TTC3-225ENST00000540756 A0A0G2JS52 829 aa30.8■■■□□ 2.52
TTC3-225ENST00000540756 RBM42Q9BTD8 480 aaKnown RBP30.79■■■□□ 2.52
TTC3-225ENST00000540756 GNAI2P04899 355 aa30.78■■■□□ 2.52
TTC3-225ENST00000540756 CWF19L2Q2TBE0 894 aaKnown RBP30.78■■■□□ 2.52
TTC3-225ENST00000540756 SLC4A9Q96Q91 983 aa30.78■■■□□ 2.52
TTC3-225ENST00000540756 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.78■■■□□ 2.52
TTC3-225ENST00000540756 AFF2P51816 1311 aa30.77■■■□□ 2.52
TTC3-225ENST00000540756 RPAP2Q8IXW5 612 aaPredicted RBP30.77■■■□□ 2.52
TTC3-225ENST00000540756 GNAI3P08754 354 aa30.76■■■□□ 2.52
TTC3-225ENST00000540756 NBPF7P0C2Y1 421 aaPredicted RBP30.76■■■□□ 2.52
TTC3-225ENST00000540756 DNAJC10Q8IXB1 793 aa30.76■■■□□ 2.52
TTC3-225ENST00000540756 LRRFIP2Q9Y608 721 aaKnown RBP30.76■■■□□ 2.52
TTC3-225ENST00000540756 DDX58O95786 925 aaKnown RBP30.76■■■□□ 2.51
TTC3-225ENST00000540756 RIC3Q7Z5B4 369 aa30.76■■■□□ 2.51
TTC3-225ENST00000540756 PDE4AP27815 886 aa30.75■■■□□ 2.51
TTC3-225ENST00000540756 MYT1Q01538 1121 aa30.75■■■□□ 2.51
TTC3-225ENST00000540756 NUCB1Q02818 461 aa30.74■■■□□ 2.51
TTC3-225ENST00000540756 UBTFL1P0CB47 393 aaPredicted RBP30.73■■■□□ 2.51
TTC3-225ENST00000540756 ANKRD13DQ6ZTN6 518 aa30.73■■■□□ 2.51
TTC3-225ENST00000540756 GCC1Q96CN9 775 aa30.73■■■□□ 2.51
TTC3-225ENST00000540756 LNPKQ9C0E8 428 aa30.73■■■□□ 2.51
TTC3-225ENST00000540756 KCNQ2O43526 872 aa30.72■■■□□ 2.51
TTC3-225ENST00000540756 ANKRD45Q5TZF3 282 aa30.72■■■□□ 2.51
TTC3-225ENST00000540756 DCTPP1Q9H773 170 aa30.72■■■□□ 2.51
TTC3-225ENST00000540756 IGKV5-2P06315 115 aa30.71■■■□□ 2.51
TTC3-225ENST00000540756 TTLL7Q6ZT98 887 aa30.71■■■□□ 2.51
TTC3-225ENST00000540756 PNMA6EA0A0J9YXQ4 647 aa30.7■■■□□ 2.51
TTC3-225ENST00000540756 VSIG10Q8N0Z9 540 aa30.7■■■□□ 2.51
TTC3-225ENST00000540756 ERBB4Q15303 1308 aa30.7■■■□□ 2.51
TTC3-225ENST00000540756 CHD1LQ86WJ1 897 aa30.69■■■□□ 2.5
TTC3-225ENST00000540756 GJD4Q96KN9 370 aaPredicted RBP30.69■■■□□ 2.5
TTC3-225ENST00000540756 LINS1Q8NG48 757 aa30.69■■■□□ 2.5
TTC3-225ENST00000540756 MYD88Q99836 296 aa30.69■■■□□ 2.5
TTC3-225ENST00000540756 ALDH1L1O75891 902 aa30.68■■■□□ 2.5
TTC3-225ENST00000540756 METTL22Q9BUU2 404 aaPredicted RBP30.68■■■□□ 2.5
TTC3-225ENST00000540756 ARFGEF2Q9Y6D5 1785 aa30.68■■■□□ 2.5
TTC3-225ENST00000540756 FAM182BQ5T319 152 aa30.68■■■□□ 2.5
TTC3-225ENST00000540756 BACH2Q9BYV9 841 aa30.68■■■□□ 2.5
TTC3-225ENST00000540756 THSD7AQ9UPZ6 1657 aa30.66■■■□□ 2.5
TTC3-225ENST00000540756 ATP8B2P98198 1209 aa30.66■■■□□ 2.5
TTC3-225ENST00000540756 C9orf78Q9NZ63 289 aaPredicted RBP30.66■■■□□ 2.5
TTC3-225ENST00000540756 PTF1AQ7RTS3 328 aa30.65■■■□□ 2.5
TTC3-225ENST00000540756 BCL11AQ9H165 835 aa30.65■■■□□ 2.5
TTC3-225ENST00000540756 ZNF330Q9Y3S2 320 aaPredicted RBP30.65■■■□□ 2.5
TTC3-225ENST00000540756 NEURL1BA8MQ27 555 aa30.64■■■□□ 2.5
TTC3-225ENST00000540756 APBB1O00213 710 aa30.64■■■□□ 2.5
TTC3-225ENST00000540756 PLBD2Q8NHP8 589 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms