RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
TSFM-207ENST00000540550 DDX58O95786 925 aaKnown RBP18.43■□□□□ 0.54
TSFM-207ENST00000540550 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
TSFM-207ENST00000540550 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
TSFM-207ENST00000540550 STRN4Q9NRL3 753 aa18.43■□□□□ 0.54
TSFM-207ENST00000540550 ROBO1Q9Y6N7 1651 aa18.42■□□□□ 0.54
TSFM-207ENST00000540550 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
TSFM-207ENST00000540550 KSR2Q6VAB6 950 aa18.42■□□□□ 0.54
TSFM-207ENST00000540550 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
TSFM-207ENST00000540550 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
TSFM-207ENST00000540550 IL2RBP14784 551 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 LAMB4A4D0S4 1761 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 CDC45O75419 566 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 FMNL2Q96PY5 1086 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 EXOC6BQ9Y2D4 811 aa18.41■□□□□ 0.54
TSFM-207ENST00000540550 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
TSFM-207ENST00000540550 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
TSFM-207ENST00000540550 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
TSFM-207ENST00000540550 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.53
TSFM-207ENST00000540550 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
TSFM-207ENST00000540550 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
TSFM-207ENST00000540550 LARP1Q6PKG0 1096 aaKnown RBP18.39■□□□□ 0.53
TSFM-207ENST00000540550 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.53
TSFM-207ENST00000540550 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
TSFM-207ENST00000540550 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
TSFM-207ENST00000540550 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
TSFM-207ENST00000540550 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
TSFM-207ENST00000540550 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
TSFM-207ENST00000540550 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
TSFM-207ENST00000540550 PDIA6Q15084 440 aa18.37■□□□□ 0.53
TSFM-207ENST00000540550 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
TSFM-207ENST00000540550 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
TSFM-207ENST00000540550 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
TSFM-207ENST00000540550 PPP1R42Q7Z4L9 355 aa18.37■□□□□ 0.53
TSFM-207ENST00000540550 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
TSFM-207ENST00000540550 MYL6BP14649 208 aa18.36■□□□□ 0.53
TSFM-207ENST00000540550 NBR1Q14596 966 aa18.36■□□□□ 0.53
TSFM-207ENST00000540550 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
TSFM-207ENST00000540550 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
TSFM-207ENST00000540550 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 POLA2Q14181 598 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 RIC3Q7Z5B4 369 aa18.35■□□□□ 0.53
TSFM-207ENST00000540550 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
TSFM-207ENST00000540550 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
TSFM-207ENST00000540550 NEXNQ0ZGT2 675 aa18.34■□□□□ 0.53
TSFM-207ENST00000540550 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
TSFM-207ENST00000540550 OSBPL3Q9H4L5 887 aa18.34■□□□□ 0.53
TSFM-207ENST00000540550 GLI3P10071 1580 aa18.34■□□□□ 0.53
TSFM-207ENST00000540550 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.53
TSFM-207ENST00000540550 PDE1AP54750 535 aa18.33■□□□□ 0.53
TSFM-207ENST00000540550 XAGE3Q8WTP9 111 aa18.33■□□□□ 0.53
TSFM-207ENST00000540550 BTG4Q9NY30 223 aa18.33■□□□□ 0.53
TSFM-207ENST00000540550 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
TSFM-207ENST00000540550 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
TSFM-207ENST00000540550 SDSP20132 328 aa18.32■□□□□ 0.52
TSFM-207ENST00000540550 CWF19L2Q2TBE0 894 aaKnown RBP18.32■□□□□ 0.52
TSFM-207ENST00000540550 AFDNP55196 1824 aaKnown RBP18.32■□□□□ 0.52
TSFM-207ENST00000540550 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
TSFM-207ENST00000540550 MX1P20591 662 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
TSFM-207ENST00000540550 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 GRM8O00222 908 aa18.31■□□□□ 0.52
TSFM-207ENST00000540550 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
TSFM-207ENST00000540550 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
TSFM-207ENST00000540550 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
TSFM-207ENST00000540550 ERBB4Q15303 1308 aa18.3■□□□□ 0.52
TSFM-207ENST00000540550 MTX1Q13505 466 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 PLCH1Q4KWH8 1693 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 KCPQ6ZWJ8 1503 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 METTL22Q9BUU2 404 aaPredicted RBP18.29■□□□□ 0.52
TSFM-207ENST00000540550 UTYO14607 1347 aa18.29■□□□□ 0.52
TSFM-207ENST00000540550 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
TSFM-207ENST00000540550 MYD88Q99836 296 aa18.28■□□□□ 0.52
TSFM-207ENST00000540550 AOX1Q06278 1338 aa18.28■□□□□ 0.52
TSFM-207ENST00000540550 WNK3Q9BYP7 1800 aa18.28■□□□□ 0.52
TSFM-207ENST00000540550 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
TSFM-207ENST00000540550 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.52
TSFM-207ENST00000540550 STAP2Q9UGK3 403 aa18.27■□□□□ 0.52
TSFM-207ENST00000540550 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.51
TSFM-207ENST00000540550 IGKV5-2P06315 115 aa18.27■□□□□ 0.51
TSFM-207ENST00000540550 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.51
TSFM-207ENST00000540550 LRP10Q7Z4F1 713 aa18.27■□□□□ 0.51
TSFM-207ENST00000540550 HSCBQ8IWL3 235 aa18.27■□□□□ 0.51
TSFM-207ENST00000540550 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.51
TSFM-207ENST00000540550 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
TSFM-207ENST00000540550 TNS2Q63HR2 1409 aa18.26■□□□□ 0.51
TSFM-207ENST00000540550 SUCLG2Q96I99 432 aa18.25■□□□□ 0.51
TSFM-207ENST00000540550 ITGB4P16144 1822 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms