RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 GLTPD2A6NH11 291 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 CAPN15O75808 1086 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
MDM1-211ENST00000540476 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
MDM1-211ENST00000540476 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
MDM1-211ENST00000540476 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
MDM1-211ENST00000540476 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
MDM1-211ENST00000540476 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
MDM1-211ENST00000540476 NARFQ9UHQ1 456 aa13.18□□□□□ -0.3
MDM1-211ENST00000540476 H0YIN7 160 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 PRELPP51888 382 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 RASSF7Q02833 373 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 PANK3Q9H999 370 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
MDM1-211ENST00000540476 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
MDM1-211ENST00000540476 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
MDM1-211ENST00000540476 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
MDM1-211ENST00000540476 NFIXQ14938 502 aa13.16□□□□□ -0.3
MDM1-211ENST00000540476 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
MDM1-211ENST00000540476 SERPINB2P05120 415 aa13.15□□□□□ -0.3
MDM1-211ENST00000540476 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
MDM1-211ENST00000540476 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
MDM1-211ENST00000540476 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
MDM1-211ENST00000540476 COL15A1P39059 1388 aa13.15□□□□□ -0.3
MDM1-211ENST00000540476 ARFGEF1Q9Y6D6 1849 aa13.15□□□□□ -0.3
MDM1-211ENST00000540476 A0A087WZG4 1122 aa13.14□□□□□ -0.31
MDM1-211ENST00000540476 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
MDM1-211ENST00000540476 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
MDM1-211ENST00000540476 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
MDM1-211ENST00000540476 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
MDM1-211ENST00000540476 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
MDM1-211ENST00000540476 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
MDM1-211ENST00000540476 STARD3NLO95772 234 aa13.13□□□□□ -0.31
MDM1-211ENST00000540476 PDE6BP35913 854 aa13.13□□□□□ -0.31
MDM1-211ENST00000540476 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
MDM1-211ENST00000540476 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
MDM1-211ENST00000540476 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
MDM1-211ENST00000540476 IL13P35225 146 aa13.12□□□□□ -0.31
MDM1-211ENST00000540476 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
MDM1-211ENST00000540476 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
MDM1-211ENST00000540476 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
MDM1-211ENST00000540476 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
MDM1-211ENST00000540476 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
MDM1-211ENST00000540476 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
MDM1-211ENST00000540476 NFKBIEO00221 500 aa13.1□□□□□ -0.31
MDM1-211ENST00000540476 NPHP1O15259 732 aa13.1□□□□□ -0.31
MDM1-211ENST00000540476 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
MDM1-211ENST00000540476 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
MDM1-211ENST00000540476 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
MDM1-211ENST00000540476 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
MDM1-211ENST00000540476 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
MDM1-211ENST00000540476 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
MDM1-211ENST00000540476 MYH14Q7Z406 1995 aaKnown RBP13.1□□□□□ -0.31
MDM1-211ENST00000540476 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
MDM1-211ENST00000540476 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
MDM1-211ENST00000540476 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
MDM1-211ENST00000540476 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
MDM1-211ENST00000540476 TJP1Q07157 1748 aa13.08□□□□□ -0.32
MDM1-211ENST00000540476 TAOK3Q9H2K8 898 aa13.08□□□□□ -0.32
MDM1-211ENST00000540476 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 C21orf2O43822 256 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 HMOX1P09601 288 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
MDM1-211ENST00000540476 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
MDM1-211ENST00000540476 TEFQ10587 303 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
MDM1-211ENST00000540476 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
MDM1-211ENST00000540476 PCNTO95613 3336 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 MRC1P22897 1456 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 POTECB2RU33 542 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 ST5P78524 1137 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
MDM1-211ENST00000540476 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
MDM1-211ENST00000540476 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
MDM1-211ENST00000540476 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
MDM1-211ENST00000540476 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
MDM1-211ENST00000540476 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
MDM1-211ENST00000540476 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
MDM1-211ENST00000540476 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
MDM1-211ENST00000540476 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
MDM1-211ENST00000540476 ADAMTS7Q9UKP4 1686 aa13.04□□□□□ -0.32
MDM1-211ENST00000540476 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 DDNO94850 711 aaPredicted RBP13.03□□□□□ -0.32
MDM1-211ENST00000540476 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 MASTLQ96GX5 879 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
MDM1-211ENST00000540476 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
MDM1-211ENST00000540476 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms