RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
COPS7A-211ENST00000540408 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
COPS7A-211ENST00000540408 TJP1Q07157 1748 aa16.88■□□□□ 0.29
COPS7A-211ENST00000540408 STARD3NLO95772 234 aa16.88■□□□□ 0.29
COPS7A-211ENST00000540408 NFIXQ14938 502 aa16.88■□□□□ 0.29
COPS7A-211ENST00000540408 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
COPS7A-211ENST00000540408 DNAJC5GQ8N7S2 189 aa16.88■□□□□ 0.29
COPS7A-211ENST00000540408 SERPINB2P05120 415 aa16.87■□□□□ 0.29
COPS7A-211ENST00000540408 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
COPS7A-211ENST00000540408 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
COPS7A-211ENST00000540408 COL15A1P39059 1388 aa16.87■□□□□ 0.29
COPS7A-211ENST00000540408 A0A087WZG4 1122 aa16.86■□□□□ 0.29
COPS7A-211ENST00000540408 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
COPS7A-211ENST00000540408 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
COPS7A-211ENST00000540408 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
COPS7A-211ENST00000540408 H0YIN7 160 aa16.85■□□□□ 0.29
COPS7A-211ENST00000540408 LMNB1P20700 586 aa16.85■□□□□ 0.29
COPS7A-211ENST00000540408 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
COPS7A-211ENST00000540408 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
COPS7A-211ENST00000540408 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
COPS7A-211ENST00000540408 TEX13AQ9BXU3 409 aaPredicted RBP16.85■□□□□ 0.29
COPS7A-211ENST00000540408 TEFQ10587 303 aa16.84■□□□□ 0.29
COPS7A-211ENST00000540408 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
COPS7A-211ENST00000540408 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
COPS7A-211ENST00000540408 MRC1P22897 1456 aa16.83■□□□□ 0.28
COPS7A-211ENST00000540408 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.28
COPS7A-211ENST00000540408 KLRG1Q96E93 195 aa16.83■□□□□ 0.28
COPS7A-211ENST00000540408 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
COPS7A-211ENST00000540408 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
COPS7A-211ENST00000540408 RASSF7Q02833 373 aa16.82■□□□□ 0.28
COPS7A-211ENST00000540408 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
COPS7A-211ENST00000540408 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
COPS7A-211ENST00000540408 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
COPS7A-211ENST00000540408 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
COPS7A-211ENST00000540408 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-211ENST00000540408 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-211ENST00000540408 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
COPS7A-211ENST00000540408 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
COPS7A-211ENST00000540408 PDE6BP35913 854 aa16.8■□□□□ 0.28
COPS7A-211ENST00000540408 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
COPS7A-211ENST00000540408 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
COPS7A-211ENST00000540408 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
COPS7A-211ENST00000540408 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
COPS7A-211ENST00000540408 WDR90Q96KV7 1748 aa16.79■□□□□ 0.28
COPS7A-211ENST00000540408 NPHP1O15259 732 aa16.79■□□□□ 0.28
COPS7A-211ENST00000540408 HTRA3P83110 453 aa16.79■□□□□ 0.28
COPS7A-211ENST00000540408 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
COPS7A-211ENST00000540408 SBF1O95248 1867 aa16.78■□□□□ 0.28
COPS7A-211ENST00000540408 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
COPS7A-211ENST00000540408 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-211ENST00000540408 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-211ENST00000540408 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
COPS7A-211ENST00000540408 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
COPS7A-211ENST00000540408 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
COPS7A-211ENST00000540408 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.28
COPS7A-211ENST00000540408 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
COPS7A-211ENST00000540408 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
COPS7A-211ENST00000540408 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
COPS7A-211ENST00000540408 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
COPS7A-211ENST00000540408 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
COPS7A-211ENST00000540408 NRXN2Q9P2S2 1712 aa16.76■□□□□ 0.27
COPS7A-211ENST00000540408 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
COPS7A-211ENST00000540408 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
COPS7A-211ENST00000540408 VIRMAQ69YN4 1812 aaKnown RBP16.75■□□□□ 0.27
COPS7A-211ENST00000540408 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
COPS7A-211ENST00000540408 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 NFKBIEO00221 500 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 C21orf2O43822 256 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 ST5P78524 1137 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-211ENST00000540408 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
COPS7A-211ENST00000540408 A1BGP04217 495 aa16.73■□□□□ 0.27
COPS7A-211ENST00000540408 PRELPP51888 382 aa16.73■□□□□ 0.27
COPS7A-211ENST00000540408 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
COPS7A-211ENST00000540408 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
COPS7A-211ENST00000540408 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
COPS7A-211ENST00000540408 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
COPS7A-211ENST00000540408 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
COPS7A-211ENST00000540408 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
COPS7A-211ENST00000540408 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
COPS7A-211ENST00000540408 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
COPS7A-211ENST00000540408 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
COPS7A-211ENST00000540408 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
COPS7A-211ENST00000540408 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
COPS7A-211ENST00000540408 STYK1Q6J9G0 422 aa16.7■□□□□ 0.26
COPS7A-211ENST00000540408 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
COPS7A-211ENST00000540408 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
COPS7A-211ENST00000540408 CAMTA2O94983 1202 aa16.69■□□□□ 0.26
COPS7A-211ENST00000540408 COL13A1Q5TAT6 717 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-211ENST00000540408 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
COPS7A-211ENST00000540408 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
COPS7A-211ENST00000540408 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
COPS7A-211ENST00000540408 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-211ENST00000540408 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
COPS7A-211ENST00000540408 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-211ENST00000540408 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
COPS7A-211ENST00000540408 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
COPS7A-211ENST00000540408 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms