RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
CYB561A3-215ENST00000540317 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
CYB561A3-215ENST00000540317 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
CYB561A3-215ENST00000540317 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.03
CYB561A3-215ENST00000540317 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.03
CYB561A3-215ENST00000540317 IFT57Q9NWB7 429 aa15.27■□□□□ 0.03
CYB561A3-215ENST00000540317 C5P01031 1676 aa15.26■□□□□ 0.03
CYB561A3-215ENST00000540317 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CYB561A3-215ENST00000540317 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
CYB561A3-215ENST00000540317 SLC4A9Q96Q91 983 aa15.26■□□□□ 0.03
CYB561A3-215ENST00000540317 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
CYB561A3-215ENST00000540317 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
CYB561A3-215ENST00000540317 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
CYB561A3-215ENST00000540317 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
CYB561A3-215ENST00000540317 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
CYB561A3-215ENST00000540317 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 QSER1Q2KHR3 1735 aa15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 ZKSCAN2Q63HK3 967 aa15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
CYB561A3-215ENST00000540317 DLG5Q8TDM6 1919 aa15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 TUBGCP6Q96RT7 1819 aa15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 ZNF853P0CG23 659 aa15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 GAS2L2Q8NHY3 880 aa15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
CYB561A3-215ENST00000540317 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 YY1P25490 414 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 SLC39A6Q13433 755 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 GPR162Q16538 588 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
CYB561A3-215ENST00000540317 GNAT3A8MTJ3 354 aa15.21■□□□□ 0.03
CYB561A3-215ENST00000540317 MAP3K5Q99683 1374 aa15.21■□□□□ 0.03
CYB561A3-215ENST00000540317 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 RFC4P35249 363 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 TEFQ10587 303 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 NLGN2Q8NFZ4 835 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 CNTNAP4Q9C0A0 1308 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 CRKLP46109 303 aaKnown RBP15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 IL17REQ8NFR9 667 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 SSH1Q8WYL5 1049 aa15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
CYB561A3-215ENST00000540317 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
CYB561A3-215ENST00000540317 ADRA2BP18089 450 aa15.18■□□□□ 0.02
CYB561A3-215ENST00000540317 FTSJ3Q8IY81 847 aaKnown RBP15.18■□□□□ 0.02
CYB561A3-215ENST00000540317 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
CYB561A3-215ENST00000540317 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
CYB561A3-215ENST00000540317 MVPQ14764 893 aaKnown RBP15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 DNAJC10Q8IXB1 793 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 MBIPQ9NS73 344 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 UTRNP46939 3433 aa15.17■□□□□ 0.02
CYB561A3-215ENST00000540317 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
CYB561A3-215ENST00000540317 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
CYB561A3-215ENST00000540317 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
CYB561A3-215ENST00000540317 SCN11AQ9UI33 1791 aa15.16■□□□□ 0.02
CYB561A3-215ENST00000540317 VAMP4O75379 141 aa15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 MMP10P09238 476 aa15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 INTS5Q6P9B9 1019 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 THUMPD2Q9BTF0 503 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
CYB561A3-215ENST00000540317 CHL1O00533 1208 aa15.14■□□□□ 0.01
CYB561A3-215ENST00000540317 RLBP1P12271 317 aa15.14■□□□□ 0.01
CYB561A3-215ENST00000540317 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
CYB561A3-215ENST00000540317 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-215ENST00000540317 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 GYS1P13807 737 aa15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 TRIM27P14373 513 aa15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 ZNF790Q6PG37 636 aa15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
CYB561A3-215ENST00000540317 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
CYB561A3-215ENST00000540317 MCM10Q7L590 875 aa15.12■□□□□ 0.01
CYB561A3-215ENST00000540317 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
CYB561A3-215ENST00000540317 MRC1P22897 1456 aa15.12■□□□□ 0.01
CYB561A3-215ENST00000540317 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
CYB561A3-215ENST00000540317 ZPR1O75312 459 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 STARD3NLO95772 234 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 RWDD1Q9H446 243 aaPredicted RBP15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
CYB561A3-215ENST00000540317 YBX3P16989 372 aaKnown RBP eCLIP15.1■□□□□ 0.014e-6■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms