RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 CLASP1Q7Z460 1538 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 FYB1O15117 783 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 NF2P35240 595 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 DDB1Q16531 1140 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 BMP2KLQ5H9B9 411 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
RTL9-203ENST00000540313 MPHOSPH6Q99547 160 aaKnown RBP7.68□□□□□ -1.18
RTL9-203ENST00000540313 SIL1Q9H173 461 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 EXOC6BQ9Y2D4 811 aa7.68□□□□□ -1.18
RTL9-203ENST00000540313 SKIDA1Q1XH10 827 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 NUTM1Q86Y26 1132 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 ZFYVE16Q7Z3T8 1539 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 TRIM27P14373 513 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 CALRP27797 417 aaKnown RBP7.67□□□□□ -1.18
RTL9-203ENST00000540313 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 HDAC9Q9UKV0 1011 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 KCNA6P17658 529 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 KIF18AQ8NI77 898 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 SCAND2PQ9GZW5 306 aaPredicted RBP7.67□□□□□ -1.18
RTL9-203ENST00000540313 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 ZSCAN23Q3MJ62 389 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 CT47A1Q5JQC4 288 aaPredicted RBP7.67□□□□□ -1.18
RTL9-203ENST00000540313 CLIP2Q9UDT6 1046 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 TBX22Q9Y458 520 aa7.67□□□□□ -1.18
RTL9-203ENST00000540313 SFPQP23246 707 aaKnown RBP eCLIP7.66□□□□□ -1.18
RTL9-203ENST00000540313 SAMD1Q6SPF0 538 aaPredicted RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 FERMT3Q86UX7 667 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 ZSCAN29Q8IWY8 852 aaPredicted RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 C14orf93Q9H972 538 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 SH2B1Q9NRF2 756 aaPredicted RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 GOLGA6L10A6NI86 522 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 MPHOSPH10O00566 681 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 TNNT1P13805 278 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 PPP4R3BQ5MIZ7 849 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 CCDC102AQ96A19 550 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 ZMYND15Q9H091 742 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 ANO10Q9NW15 660 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 CDKL5O76039 1030 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 ADCY5O95622 1261 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 IFIT1P09914 478 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 HSP90AB2PQ58FF8 381 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 CCDC181Q5TID7 509 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 PRIMPOLQ96LW4 560 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 NYXQ9GZU5 481 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 RBM27Q9P2N5 1060 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 IQCEQ6IPM2 695 aa7.66□□□□□ -1.18
RTL9-203ENST00000540313 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
RTL9-203ENST00000540313 ZSCAN12O43309 604 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 WAPLQ7Z5K2 1190 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 KIF1BPQ96EK5 621 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 CDC5LQ99459 802 aaKnown RBP7.65□□□□□ -1.18
RTL9-203ENST00000540313 ARHGEF10O15013 1369 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 NOS1P29475 1434 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 NEMFO60524 1076 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 USP8P40818 1118 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 STIM1Q13586 685 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 CFAP100Q494V2 611 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 LRSAM1Q6UWE0 723 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 DDX46Q7L014 1031 aaKnown RBP7.65□□□□□ -1.18
RTL9-203ENST00000540313 TXLNBQ8N3L3 684 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 DDX11Q96FC9 970 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 THUMPD2Q9BTF0 503 aaKnown RBP7.65□□□□□ -1.18
RTL9-203ENST00000540313 ANKIB1Q9P2G1 1089 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 CEP126Q9P2H0 1117 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 CCDC69A6NI79 296 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 TRIM21P19474 475 aaKnown RBP7.65□□□□□ -1.18
RTL9-203ENST00000540313 RRS1Q15050 365 aaKnown RBP7.65□□□□□ -1.18
RTL9-203ENST00000540313 MPRIPQ6WCQ1 1025 aa7.65□□□□□ -1.18
RTL9-203ENST00000540313 GLRX3O76003 335 aaKnown RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 ZCRB1Q8TBF4 217 aaKnown RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 CDK5RAP3Q96JB5 506 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 PANK2Q9BZ23 570 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 GBP3Q9H0R5 595 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 CALCOCO1Q9P1Z2 691 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 LIMCH1Q9UPQ0 1083 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 GPATCH8Q9UKJ3 1502 aaKnown RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 FAM193AP78312 1265 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 C16orf45Q96MC5 204 aaPredicted RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 DEF6Q9H4E7 631 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.19
RTL9-203ENST00000540313 CTNNA3Q9UI47 895 aa7.65□□□□□ -1.19
RTL9-203ENST00000540313 DISP3Q9P2K9 1392 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 LDHCP07864 332 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 HDAC1Q13547 482 aaPredicted RBP7.64□□□□□ -1.19
RTL9-203ENST00000540313 ANKRD24Q8TF21 1146 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 HYPKQ9NX55 129 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 EPB41L2O43491 1005 aaKnown RBP7.64□□□□□ -1.19
RTL9-203ENST00000540313 ERLIN2O94905 339 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 MYL6BP14649 208 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 HSPA2P54652 639 aa7.64□□□□□ -1.19
RTL9-203ENST00000540313 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
RTL9-203ENST00000540313 ARHGAP29Q52LW3 1261 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms