RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 YY1P25490 414 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 TNNT3P45378 269 aaPredicted RBP10.55□□□□□ -0.72
DDB1-217ENST00000540166 DMTNQ08495 405 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 MARCH10Q8NA82 808 aaPredicted RBP10.55□□□□□ -0.72
DDB1-217ENST00000540166 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 NOL7Q9UMY1 257 aaKnown RBP10.55□□□□□ -0.72
DDB1-217ENST00000540166 KIF3AQ9Y496 699 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
DDB1-217ENST00000540166 NALCNQ8IZF0 1738 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
DDB1-217ENST00000540166 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 UTP14CQ5TAP6 766 aaKnown RBP10.54□□□□□ -0.72
DDB1-217ENST00000540166 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 FLT4P35916 1363 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 ZPR1O75312 459 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 CPDO75976 1380 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 INSRP06213 1382 aa10.54□□□□□ -0.72
DDB1-217ENST00000540166 NRXN3Q9Y4C0 1643 aa10.53□□□□□ -0.72
DDB1-217ENST00000540166 MSL1Q68DK7 614 aa10.53□□□□□ -0.72
DDB1-217ENST00000540166 TSR2Q969E8 191 aaKnown RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 K7ELQ4 463 aaPredicted RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 SSFA2P28290 1259 aa10.53□□□□□ -0.72
DDB1-217ENST00000540166 FOXD4L5Q5VV16 416 aaPredicted RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 FOXD4L4Q8WXT5 416 aaPredicted RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 LNPKQ9C0E8 428 aa10.53□□□□□ -0.72
DDB1-217ENST00000540166 DIAPH3Q9NSV4 1193 aa10.53□□□□□ -0.72
DDB1-217ENST00000540166 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
DDB1-217ENST00000540166 CCDC66A2RUB6 948 aa10.52□□□□□ -0.72
DDB1-217ENST00000540166 SLC15A2Q16348 729 aa10.52□□□□□ -0.72
DDB1-217ENST00000540166 MPNDQ8N594 471 aa10.52□□□□□ -0.72
DDB1-217ENST00000540166 DDX19BQ9UMR2 479 aa10.52□□□□□ -0.72
DDB1-217ENST00000540166 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 SLIT2O94813 1529 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 GNPATO15228 680 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 CPSF1Q10570 1443 aaKnown RBP10.52□□□□□ -0.73
DDB1-217ENST00000540166 ZNF521Q96K83 1311 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 KCNQ4P56696 695 aa10.52□□□□□ -0.73
DDB1-217ENST00000540166 RLBP1P12271 317 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
DDB1-217ENST00000540166 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
DDB1-217ENST00000540166 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 RAB3GAP1Q15042 981 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 VGLL3A8MV65 326 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 PLSCR1O15162 318 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 ZNF500O60304 480 aaPredicted RBP10.51□□□□□ -0.73
DDB1-217ENST00000540166 ANKRD45Q5TZF3 282 aa10.51□□□□□ -0.73
DDB1-217ENST00000540166 TRAPPC3LQ5T215 181 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 SBNO2Q9Y2G9 1366 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 IGSF3O75054 1194 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 BAG4O95429 457 aaKnown RBP10.5□□□□□ -0.73
DDB1-217ENST00000540166 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
DDB1-217ENST00000540166 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 CARD14Q9BXL6 1004 aa10.5□□□□□ -0.73
DDB1-217ENST00000540166 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
DDB1-217ENST00000540166 ST18O60284 1047 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 SMC5Q8IY18 1101 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 SYCE3A1L190 88 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 STARD3NLO95772 234 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 TRMT2AQ8IZ69 625 aaKnown RBP10.49□□□□□ -0.73
DDB1-217ENST00000540166 SLC16A10Q8TF71 515 aa10.49□□□□□ -0.73
DDB1-217ENST00000540166 BICDL1Q6ZP65 573 aa10.48□□□□□ -0.73
DDB1-217ENST00000540166 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
DDB1-217ENST00000540166 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
DDB1-217ENST00000540166 EYA1Q99502 592 aa10.48□□□□□ -0.73
DDB1-217ENST00000540166 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 GOLGA6L6A8MZA4 724 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 SNX21Q969T3 373 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 APBB1O00213 710 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 MBD3O95983 291 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 TSPY26PQ9H489 355 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
DDB1-217ENST00000540166 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 XIRP1Q702N8 1843 aaKnown RBP10.47□□□□□ -0.73
DDB1-217ENST00000540166 KCNJ4P48050 445 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 DRC7Q8IY82 874 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
DDB1-217ENST00000540166 MYRIPQ8NFW9 859 aa10.46□□□□□ -0.73
DDB1-217ENST00000540166 DCAF5Q96JK2 942 aa10.46□□□□□ -0.73
DDB1-217ENST00000540166 RBSNQ9H1K0 784 aa10.46□□□□□ -0.73
DDB1-217ENST00000540166 GRIN3BO60391 1043 aa10.46□□□□□ -0.73
DDB1-217ENST00000540166 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.73
DDB1-217ENST00000540166 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
DDB1-217ENST00000540166 FOXD4L6Q3SYB3 417 aaPredicted RBP10.46□□□□□ -0.74
DDB1-217ENST00000540166 FOXD4L3Q6VB84 417 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms