RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
CDH19-203ENST00000540086 ASAP1Q9ULH1 1129 aa8.76□□□□□ -1.01
CDH19-203ENST00000540086 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
CDH19-203ENST00000540086 PRIM1P49642 420 aaKnown RBP8.75□□□□□ -1.01
CDH19-203ENST00000540086 SLC4A10Q6U841 1118 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
CDH19-203ENST00000540086 CHMP4AQ9BY43 222 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 DBF4Q9UBU7 674 aaPredicted RBP8.75□□□□□ -1.01
CDH19-203ENST00000540086 USP16Q9Y5T5 823 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
CDH19-203ENST00000540086 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 TOGARAM1Q9Y4F4 1720 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 BCL9O00512 1426 aa8.75□□□□□ -1.01
CDH19-203ENST00000540086 PIP4K2AP48426 406 aaPredicted RBP8.74□□□□□ -1.01
CDH19-203ENST00000540086 PDIA6Q15084 440 aa8.74□□□□□ -1.01
CDH19-203ENST00000540086 ATRNO75882 1429 aa8.74□□□□□ -1.01
CDH19-203ENST00000540086 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
CDH19-203ENST00000540086 WNK3Q9BYP7 1800 aa8.74□□□□□ -1.01
CDH19-203ENST00000540086 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
CDH19-203ENST00000540086 MYL6BP14649 208 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 AAMPQ13685 434 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 INTS3Q68E01 1043 aaKnown RBP8.73□□□□□ -1.01
CDH19-203ENST00000540086 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
CDH19-203ENST00000540086 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
CDH19-203ENST00000540086 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH19-203ENST00000540086 ZBTB40Q9NUA8 1239 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 IGHDP01880 384 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 C1orf115Q9H7X2 142 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 HYPKQ9NX55 129 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 KDM2BQ8NHM5 1336 aa8.73□□□□□ -1.01
CDH19-203ENST00000540086 GLI3P10071 1580 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 PI4KAP2A4QPH2 592 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 KCNQ2O43526 872 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
CDH19-203ENST00000540086 AIMP1Q12904 312 aaKnown RBP8.72□□□□□ -1.01
CDH19-203ENST00000540086 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 PI4KAP1Q8N8J0 262 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 VIRMAQ69YN4 1812 aaKnown RBP8.72□□□□□ -1.01
CDH19-203ENST00000540086 ADCY9O60503 1353 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 CENPQQ7L2Z9 268 aaPredicted RBP8.72□□□□□ -1.01
CDH19-203ENST00000540086 DNAJC10Q8IXB1 793 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 XAGE3Q8WTP9 111 aa8.72□□□□□ -1.01
CDH19-203ENST00000540086 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.71□□□□□ -1.01
CDH19-203ENST00000540086 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 A1BGP04217 495 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
CDH19-203ENST00000540086 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 DNAAF4Q8WXU2 420 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 MEIS3Q99687 375 aa8.71□□□□□ -1.02
CDH19-203ENST00000540086 CHMP4BQ9H444 224 aaKnown RBP8.71□□□□□ -1.02
CDH19-203ENST00000540086 C5P01031 1676 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
CDH19-203ENST00000540086 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 SKAP1Q86WV1 359 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 PELP1Q8IZL8 1130 aaKnown RBP8.7□□□□□ -1.02
CDH19-203ENST00000540086 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 MAP3K2Q9Y2U5 619 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 PAPPAQ13219 1627 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 THSD7AQ9UPZ6 1657 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 DDX58O95786 925 aaKnown RBP8.7□□□□□ -1.02
CDH19-203ENST00000540086 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 FBXO41Q8TF61 875 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
CDH19-203ENST00000540086 RWDD1Q9H446 243 aaPredicted RBP8.7□□□□□ -1.02
CDH19-203ENST00000540086 ERBB4Q15303 1308 aa8.69□□□□□ -1.02
CDH19-203ENST00000540086 BEND3Q5T5X7 828 aa8.69□□□□□ -1.02
CDH19-203ENST00000540086 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
CDH19-203ENST00000540086 DOT1LQ8TEK3 1739 aa8.69□□□□□ -1.02
CDH19-203ENST00000540086 PXDNLA1KZ92 1463 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 STARD3NLO95772 234 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 ZNF772Q68DY9 489 aaPredicted RBP8.68□□□□□ -1.02
CDH19-203ENST00000540086 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
CDH19-203ENST00000540086 PALLDQ8WX93 1383 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
CDH19-203ENST00000540086 HDAC1Q13547 482 aaPredicted RBP8.68□□□□□ -1.02
CDH19-203ENST00000540086 TTLL7Q6ZT98 887 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
CDH19-203ENST00000540086 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 SIK1P57059 783 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 CWF19L2Q2TBE0 894 aaKnown RBP8.67□□□□□ -1.02
CDH19-203ENST00000540086 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 SIRT2Q8IXJ6 389 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
CDH19-203ENST00000540086 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 RNF216Q9NWF9 866 aaPredicted RBP8.67□□□□□ -1.02
CDH19-203ENST00000540086 ATP10DQ9P241 1426 aa8.67□□□□□ -1.02
CDH19-203ENST00000540086 GNAI2P04899 355 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 GNAI3P08754 354 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 ITPK1Q13572 414 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 MYD88Q99836 296 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms