RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
MDH1-215ENST00000539945 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
MDH1-215ENST00000539945 VAMP4O75379 141 aa12.41□□□□□ -0.42
MDH1-215ENST00000539945 RGS20O76081 388 aa12.41□□□□□ -0.42
MDH1-215ENST00000539945 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
MDH1-215ENST00000539945 PSEN2P49810 448 aa12.41□□□□□ -0.42
MDH1-215ENST00000539945 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
MDH1-215ENST00000539945 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
MDH1-215ENST00000539945 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
MDH1-215ENST00000539945 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
MDH1-215ENST00000539945 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
MDH1-215ENST00000539945 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
MDH1-215ENST00000539945 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
MDH1-215ENST00000539945 LRRC37A3O60309 1634 aa12.4□□□□□ -0.42
MDH1-215ENST00000539945 MS4A1P11836 297 aa12.39□□□□□ -0.43
MDH1-215ENST00000539945 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
MDH1-215ENST00000539945 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
MDH1-215ENST00000539945 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
MDH1-215ENST00000539945 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
MDH1-215ENST00000539945 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
MDH1-215ENST00000539945 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
MDH1-215ENST00000539945 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
MDH1-215ENST00000539945 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
MDH1-215ENST00000539945 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
MDH1-215ENST00000539945 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
MDH1-215ENST00000539945 FOXK1P85037 733 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 AAMPQ13685 434 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 CHRNA2Q15822 529 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
MDH1-215ENST00000539945 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
MDH1-215ENST00000539945 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
MDH1-215ENST00000539945 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
MDH1-215ENST00000539945 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
MDH1-215ENST00000539945 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
MDH1-215ENST00000539945 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
MDH1-215ENST00000539945 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
MDH1-215ENST00000539945 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
MDH1-215ENST00000539945 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
MDH1-215ENST00000539945 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
MDH1-215ENST00000539945 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 RLBP1P12271 317 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 TRIM27P14373 513 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 DZIP1LQ8IYY4 767 aaKnown RBP12.35□□□□□ -0.43
MDH1-215ENST00000539945 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 COG6Q9Y2V7 657 aa12.35□□□□□ -0.43
MDH1-215ENST00000539945 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
MDH1-215ENST00000539945 RAPGEF4Q8WZA2 1011 aa12.34□□□□□ -0.43
MDH1-215ENST00000539945 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
MDH1-215ENST00000539945 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
MDH1-215ENST00000539945 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
MDH1-215ENST00000539945 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
MDH1-215ENST00000539945 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
MDH1-215ENST00000539945 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
MDH1-215ENST00000539945 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
MDH1-215ENST00000539945 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
MDH1-215ENST00000539945 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
MDH1-215ENST00000539945 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
MDH1-215ENST00000539945 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
MDH1-215ENST00000539945 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
MDH1-215ENST00000539945 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
MDH1-215ENST00000539945 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 COL5A2P05997 1499 aaPredicted RBP12.31□□□□□ -0.44
MDH1-215ENST00000539945 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
MDH1-215ENST00000539945 PPP1R37O75864 691 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 MEGF6O75095 1541 aa12.31□□□□□ -0.44
MDH1-215ENST00000539945 PTPN5P54829 565 aa12.3□□□□□ -0.44
MDH1-215ENST00000539945 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
MDH1-215ENST00000539945 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
MDH1-215ENST00000539945 PKD1L3Q7Z443 1732 aa12.29□□□□□ -0.44
MDH1-215ENST00000539945 TOM1O60784 492 aa12.29□□□□□ -0.44
MDH1-215ENST00000539945 TEFQ10587 303 aa12.29□□□□□ -0.44
MDH1-215ENST00000539945 API5Q9BZZ5 524 aaKnown RBP12.29□□□□□ -0.44
MDH1-215ENST00000539945 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
MDH1-215ENST00000539945 TOM1L2Q6ZVM7 507 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
MDH1-215ENST00000539945 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
MDH1-215ENST00000539945 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
MDH1-215ENST00000539945 ABCC4O15439 1325 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
MDH1-215ENST00000539945 PHKG2P15735 406 aa12.28□□□□□ -0.44
MDH1-215ENST00000539945 SIPA1L3O60292 1781 aaPredicted RBP12.27□□□□□ -0.45
MDH1-215ENST00000539945 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
MDH1-215ENST00000539945 PTPRCP08575 1304 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms