RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RXRBP28702 533 aa20.59■□□□□ 0.89
TRAF3-204ENST00000539721 RBM42Q9BTD8 480 aaKnown RBP20.59■□□□□ 0.89
TRAF3-204ENST00000539721 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
TRAF3-204ENST00000539721 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
TRAF3-204ENST00000539721 RLBP1P12271 317 aa20.59■□□□□ 0.89
TRAF3-204ENST00000539721 G2E3Q7L622 706 aa20.59■□□□□ 0.89
TRAF3-204ENST00000539721 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
TRAF3-204ENST00000539721 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
TRAF3-204ENST00000539721 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
TRAF3-204ENST00000539721 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
TRAF3-204ENST00000539721 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
TRAF3-204ENST00000539721 BTAF1O14981 1849 aa20.57■□□□□ 0.88
TRAF3-204ENST00000539721 FLIIQ13045 1269 aa20.57■□□□□ 0.88
TRAF3-204ENST00000539721 ANXA1P04083 346 aa20.56■□□□□ 0.88
TRAF3-204ENST00000539721 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
TRAF3-204ENST00000539721 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
TRAF3-204ENST00000539721 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
TRAF3-204ENST00000539721 RGS12O14924 1447 aa20.55■□□□□ 0.88
TRAF3-204ENST00000539721 TJP1Q07157 1748 aa20.55■□□□□ 0.88
TRAF3-204ENST00000539721 FKBP5Q13451 457 aaPredicted RBP20.54■□□□□ 0.88
TRAF3-204ENST00000539721 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 TEX13AQ9BXU3 409 aaPredicted RBP20.54■□□□□ 0.88
TRAF3-204ENST00000539721 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 ABCC4O15439 1325 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 MVPQ14764 893 aaKnown RBP20.54■□□□□ 0.88
TRAF3-204ENST00000539721 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 TMEM57Q8N5G2 664 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
TRAF3-204ENST00000539721 PDIA6Q15084 440 aa20.53■□□□□ 0.88
TRAF3-204ENST00000539721 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
TRAF3-204ENST00000539721 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
TRAF3-204ENST00000539721 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
TRAF3-204ENST00000539721 MYL6BP14649 208 aa20.52■□□□□ 0.88
TRAF3-204ENST00000539721 FAM196AQ6ZSG2 479 aa20.52■□□□□ 0.88
TRAF3-204ENST00000539721 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
TRAF3-204ENST00000539721 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
TRAF3-204ENST00000539721 CICQ96RK0 1608 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-204ENST00000539721 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
TRAF3-204ENST00000539721 LOC102724428A0A0B4J2F2 783 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 F6X3S4 739 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 STARD3NLO95772 234 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 SIK1P57059 783 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 DDX19BQ9UMR2 479 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 ZNF831Q5JPB2 1677 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
TRAF3-204ENST00000539721 A1BGP04217 495 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
TRAF3-204ENST00000539721 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
TRAF3-204ENST00000539721 SLC4A10Q6U841 1118 aa20.48■□□□□ 0.87
TRAF3-204ENST00000539721 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
TRAF3-204ENST00000539721 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
TRAF3-204ENST00000539721 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
TRAF3-204ENST00000539721 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
TRAF3-204ENST00000539721 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
TRAF3-204ENST00000539721 ILDR1Q86SU0 546 aaPredicted RBP20.47■□□□□ 0.87
TRAF3-204ENST00000539721 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
TRAF3-204ENST00000539721 PXDNLA1KZ92 1463 aa20.47■□□□□ 0.87
TRAF3-204ENST00000539721 DDX58O95786 925 aaKnown RBP20.46■□□□□ 0.87
TRAF3-204ENST00000539721 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
TRAF3-204ENST00000539721 LRP10Q7Z4F1 713 aa20.46■□□□□ 0.87
TRAF3-204ENST00000539721 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
TRAF3-204ENST00000539721 LY75O60449 1722 aa20.46■□□□□ 0.87
TRAF3-204ENST00000539721 COL5A3P25940 1745 aaPredicted RBP20.46■□□□□ 0.87
TRAF3-204ENST00000539721 PI4KAP2A4QPH2 592 aa20.45■□□□□ 0.86
TRAF3-204ENST00000539721 CCT4P50991 539 aaKnown RBP20.45■□□□□ 0.86
TRAF3-204ENST00000539721 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
TRAF3-204ENST00000539721 PI4KAP1Q8N8J0 262 aa20.45■□□□□ 0.86
TRAF3-204ENST00000539721 ADCY9O60503 1353 aa20.45■□□□□ 0.86
TRAF3-204ENST00000539721 AAMPQ13685 434 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 KSR2Q6VAB6 950 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 TRIM37O94972 964 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 ITPK1Q13572 414 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
TRAF3-204ENST00000539721 CHMP4BQ9H444 224 aaKnown RBP20.44■□□□□ 0.86
TRAF3-204ENST00000539721 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
TRAF3-204ENST00000539721 RREB1Q92766 1687 aa20.43■□□□□ 0.86
TRAF3-204ENST00000539721 ARFGEF2Q9Y6D5 1785 aa20.42■□□□□ 0.86
TRAF3-204ENST00000539721 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
TRAF3-204ENST00000539721 ZBTB1Q9Y2K1 713 aa20.41■□□□□ 0.86
TRAF3-204ENST00000539721 ZNF330Q9Y3S2 320 aaPredicted RBP20.41■□□□□ 0.86
TRAF3-204ENST00000539721 ZBTB7BO15156 539 aaPredicted RBP20.41■□□□□ 0.86
TRAF3-204ENST00000539721 CRKLP46109 303 aaKnown RBP20.4■□□□□ 0.86
TRAF3-204ENST00000539721 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
TRAF3-204ENST00000539721 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
TRAF3-204ENST00000539721 ATP10DQ9P241 1426 aa20.4■□□□□ 0.86
TRAF3-204ENST00000539721 NUP188Q5SRE5 1749 aa20.4■□□□□ 0.86
TRAF3-204ENST00000539721 ZBTB40Q9NUA8 1239 aa20.39■□□□□ 0.86
TRAF3-204ENST00000539721 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.86
TRAF3-204ENST00000539721 MYH14Q7Z406 1995 aaKnown RBP20.39■□□□□ 0.85
TRAF3-204ENST00000539721 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
TRAF3-204ENST00000539721 TTLL7Q6ZT98 887 aa20.39■□□□□ 0.85
TRAF3-204ENST00000539721 SRCIN1Q9C0H9 1055 aa20.39■□□□□ 0.85
TRAF3-204ENST00000539721 KCNQ4P56696 695 aa20.38■□□□□ 0.85
TRAF3-204ENST00000539721 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
TRAF3-204ENST00000539721 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
TRAF3-204ENST00000539721 LINC00116Q8NCU8 138 aa20.38■□□□□ 0.85
TRAF3-204ENST00000539721 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms