RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 F13A1P00488 732 aa21.12■□□□□ 0.97
RAB40C-205ENST00000539661 TTC14Q96N46 770 aa21.12■□□□□ 0.97
RAB40C-205ENST00000539661 N4BP2Q86UW6 1770 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-205ENST00000539661 RAD50Q92878 1312 aa21.12■□□□□ 0.97
RAB40C-205ENST00000539661 KIF20AO95235 890 aa21.11■□□□□ 0.97
RAB40C-205ENST00000539661 NUDT16Q96DE0 195 aaKnown RBP21.11■□□□□ 0.97
RAB40C-205ENST00000539661 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
RAB40C-205ENST00000539661 MPNDQ8N594 471 aa21.11■□□□□ 0.97
RAB40C-205ENST00000539661 TSC1Q92574 1164 aa21.11■□□□□ 0.97
RAB40C-205ENST00000539661 SPATA31D1Q6ZQQ2 1576 aa21.11■□□□□ 0.97
RAB40C-205ENST00000539661 C17orf53Q8N3J3 647 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-205ENST00000539661 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-205ENST00000539661 LIMCH1Q9UPQ0 1083 aa21.1■□□□□ 0.97
RAB40C-205ENST00000539661 SYT1P21579 422 aa21.1■□□□□ 0.97
RAB40C-205ENST00000539661 PDCL2Q8N4E4 241 aa21.1■□□□□ 0.97
RAB40C-205ENST00000539661 ANKRD7Q92527 254 aa21.1■□□□□ 0.97
RAB40C-205ENST00000539661 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
RAB40C-205ENST00000539661 UNC5CLQ8IV45 518 aa21.09■□□□□ 0.97
RAB40C-205ENST00000539661 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
RAB40C-205ENST00000539661 PNMA6EA0A0J9YXQ4 647 aa21.09■□□□□ 0.97
RAB40C-205ENST00000539661 CTIFO43310 598 aaKnown RBP21.08■□□□□ 0.97
RAB40C-205ENST00000539661 CBX1P83916 185 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 ZBTB7CA1YPR0 619 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 SLC26A8Q96RN1 970 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 TSPYL4Q9UJ04 414 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 ZHX1Q9UKY1 873 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-205ENST00000539661 SNX14Q9Y5W7 946 aa21.08■□□□□ 0.97
RAB40C-205ENST00000539661 PXDNLA1KZ92 1463 aa21.08■□□□□ 0.96
RAB40C-205ENST00000539661 SGSM2O43147 1006 aa21.08■□□□□ 0.96
RAB40C-205ENST00000539661 ATP2B3Q16720 1220 aa21.08■□□□□ 0.96
RAB40C-205ENST00000539661 KCNF1Q9H3M0 494 aa21.08■□□□□ 0.96
RAB40C-205ENST00000539661 TTC21BQ7Z4L5 1316 aa21.07■□□□□ 0.96
RAB40C-205ENST00000539661 RAB11FIP3O75154 756 aa21.07■□□□□ 0.96
RAB40C-205ENST00000539661 AK2P54819 239 aa21.07■□□□□ 0.96
RAB40C-205ENST00000539661 FAM208AQ9UK61 1670 aaKnown RBP21.06■□□□□ 0.96
RAB40C-205ENST00000539661 CACNA1FO60840 1977 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 SIRT1Q96EB6 747 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 RIOK3O14730 519 aaKnown RBP21.06■□□□□ 0.96
RAB40C-205ENST00000539661 FIBPO43427 364 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 SOS1Q07889 1333 aaPredicted RBP21.06■□□□□ 0.96
RAB40C-205ENST00000539661 SYCP1Q15431 976 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 GIMAP6Q6P9H5 292 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
RAB40C-205ENST00000539661 IL25Q9H293 177 aa21.06■□□□□ 0.96
RAB40C-205ENST00000539661 PDIA4P13667 645 aaKnown RBP21.05■□□□□ 0.96
RAB40C-205ENST00000539661 LTKP29376 864 aa21.05■□□□□ 0.96
RAB40C-205ENST00000539661 RUFY3Q7L099 469 aa21.05■□□□□ 0.96
RAB40C-205ENST00000539661 PYCARDQ9ULZ3 195 aa21.05■□□□□ 0.96
RAB40C-205ENST00000539661 FLIIQ13045 1269 aa21.05■□□□□ 0.96
RAB40C-205ENST00000539661 FEZ1Q99689 392 aa21.05■□□□□ 0.96
RAB40C-205ENST00000539661 LSG1Q9H089 658 aaKnown RBP21.05■□□□□ 0.96
RAB40C-205ENST00000539661 AP5Z1O43299 807 aa21.04■□□□□ 0.96
RAB40C-205ENST00000539661 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
RAB40C-205ENST00000539661 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
RAB40C-205ENST00000539661 NALCNQ8IZF0 1738 aa21.04■□□□□ 0.96
RAB40C-205ENST00000539661 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
RAB40C-205ENST00000539661 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
RAB40C-205ENST00000539661 ZSCAN31Q96LW9 406 aaPredicted RBP21.03■□□□□ 0.96
RAB40C-205ENST00000539661 SOX12O15370 315 aa21.03■□□□□ 0.96
RAB40C-205ENST00000539661 PEAK1Q9H792 1746 aa21.02■□□□□ 0.96
RAB40C-205ENST00000539661 PLCB2Q00722 1185 aa21.02■□□□□ 0.96
RAB40C-205ENST00000539661 SH2B1Q9NRF2 756 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-205ENST00000539661 MIS18AQ9NYP9 233 aa21.02■□□□□ 0.96
RAB40C-205ENST00000539661 LRRFIP2Q9Y608 721 aaKnown RBP21.02■□□□□ 0.96
RAB40C-205ENST00000539661 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
RAB40C-205ENST00000539661 FAM200AQ8TCP9 573 aa21.02■□□□□ 0.96
RAB40C-205ENST00000539661 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
RAB40C-205ENST00000539661 TECPR2O15040 1411 aa21.02■□□□□ 0.95
RAB40C-205ENST00000539661 CRYBG1Q9Y4K1 1723 aa21.02■□□□□ 0.95
RAB40C-205ENST00000539661 NRXN3Q9Y4C0 1643 aa21.01■□□□□ 0.95
RAB40C-205ENST00000539661 CNTROBQ8N137 903 aa21.01■□□□□ 0.95
RAB40C-205ENST00000539661 PI4K2BQ8TCG2 481 aa21.01■□□□□ 0.95
RAB40C-205ENST00000539661 FAM177BA6PVY3 158 aa21■□□□□ 0.95
RAB40C-205ENST00000539661 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
RAB40C-205ENST00000539661 DNM1Q05193 864 aaKnown RBP21■□□□□ 0.95
RAB40C-205ENST00000539661 VPS53Q5VIR6 699 aa21■□□□□ 0.95
RAB40C-205ENST00000539661 HYPKQ9NX55 129 aa21■□□□□ 0.95
RAB40C-205ENST00000539661 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
RAB40C-205ENST00000539661 GJB2P29033 226 aa20.99■□□□□ 0.95
RAB40C-205ENST00000539661 RASEFQ8IZ41 740 aa20.99■□□□□ 0.95
RAB40C-205ENST00000539661 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
RAB40C-205ENST00000539661 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-205ENST00000539661 TM6SF1Q9BZW5 370 aa20.99■□□□□ 0.95
RAB40C-205ENST00000539661 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
RAB40C-205ENST00000539661 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
RAB40C-205ENST00000539661 ELP1O95163 1332 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 POLA2Q14181 598 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 HSP90AB2PQ58FF8 381 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 SPC24Q8NBT2 197 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 USP44Q9H0E7 712 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 IL1RAPL2Q9NP60 686 aa20.98■□□□□ 0.95
RAB40C-205ENST00000539661 KDRP35968 1356 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 MAP3K11Q16584 847 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 PODXL2Q9NZ53 605 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 OGFRQ9NZT2 677 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms