RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
USP30-210ENST00000539121 SCN11AQ9UI33 1791 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 HSPA5P11021 654 aaKnown RBP8.51□□□□□ -1.05
USP30-210ENST00000539121 TM4SF1P30408 202 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 IL13P35225 146 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 FSTL1Q12841 308 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 FKBP8Q14318 412 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
USP30-210ENST00000539121 AEBP1Q8IUX7 1158 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 KDM2BQ8NHM5 1336 aa8.51□□□□□ -1.05
USP30-210ENST00000539121 POLRMTO00411 1230 aaKnown RBP8.5□□□□□ -1.05
USP30-210ENST00000539121 ZPR1O75312 459 aa8.5□□□□□ -1.05
USP30-210ENST00000539121 DDR1Q08345 913 aa8.5□□□□□ -1.05
USP30-210ENST00000539121 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
USP30-210ENST00000539121 SLC52A2Q9HAB3 445 aa8.5□□□□□ -1.05
USP30-210ENST00000539121 NMRK2Q9NPI5 230 aa8.5□□□□□ -1.05
USP30-210ENST00000539121 ZC3H4Q9UPT8 1303 aaKnown RBP8.5□□□□□ -1.05
USP30-210ENST00000539121 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
USP30-210ENST00000539121 AMER1Q5JTC6 1135 aaPredicted RBP8.49□□□□□ -1.05
USP30-210ENST00000539121 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
USP30-210ENST00000539121 SRP68Q9UHB9 627 aaKnown RBP8.49□□□□□ -1.05
USP30-210ENST00000539121 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
USP30-210ENST00000539121 SBF1O95248 1867 aa8.49□□□□□ -1.05
USP30-210ENST00000539121 TJP1Q07157 1748 aa8.49□□□□□ -1.05
USP30-210ENST00000539121 SPDYE2BA6NHP3 402 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 RNMTO43148 476 aaKnown RBP8.48□□□□□ -1.05
USP30-210ENST00000539121 SPDYE6P0CI01 402 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
USP30-210ENST00000539121 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 DNAJC10Q8IXB1 793 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 RNF181Q9P0P0 153 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 NARFQ9UHQ1 456 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 MRC1P22897 1456 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 ADAMTS7Q9UKP4 1686 aa8.48□□□□□ -1.05
USP30-210ENST00000539121 CHRNA5P30532 468 aa8.47□□□□□ -1.05
USP30-210ENST00000539121 LGR6Q9HBX8 967 aa8.47□□□□□ -1.05
USP30-210ENST00000539121 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
USP30-210ENST00000539121 STARD3NLO95772 234 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 LMNB1P20700 586 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 NFIXQ14938 502 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 TTLL6Q8N841 843 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 JMYQ8N9B5 988 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 TEX13AQ9BXU3 409 aaPredicted RBP8.46□□□□□ -1.06
USP30-210ENST00000539121 COL15A1P39059 1388 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.06
USP30-210ENST00000539121 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
USP30-210ENST00000539121 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
USP30-210ENST00000539121 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 A0A087WZG4 1122 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 GLTPD2A6NH11 291 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 DIAPH1O60610 1272 aaKnown RBP8.45□□□□□ -1.06
USP30-210ENST00000539121 SERPINB2P05120 415 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 SLC39A6Q13433 755 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 MTHFSDQ2M296 383 aaKnown RBP8.45□□□□□ -1.06
USP30-210ENST00000539121 SMC1BQ8NDV3 1235 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
USP30-210ENST00000539121 WDR90Q96KV7 1748 aa8.45□□□□□ -1.06
USP30-210ENST00000539121 H0YIN7 160 aa8.44□□□□□ -1.06
USP30-210ENST00000539121 PER1O15534 1290 aaPredicted RBP8.44□□□□□ -1.06
USP30-210ENST00000539121 HMOX1P09601 288 aa8.44□□□□□ -1.06
USP30-210ENST00000539121 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
USP30-210ENST00000539121 EIF5P55010 431 aaKnown RBP8.44□□□□□ -1.06
USP30-210ENST00000539121 DIEXFQ68CQ4 756 aaKnown RBP8.44□□□□□ -1.06
USP30-210ENST00000539121 TTC5Q8N0Z6 440 aa8.44□□□□□ -1.06
USP30-210ENST00000539121 BCL2L12Q9HB09 334 aa8.44□□□□□ -1.06
USP30-210ENST00000539121 ZBTB1Q9Y2K1 713 aa8.44□□□□□ -1.06
USP30-210ENST00000539121 UBR2Q8IWV8 1755 aa8.43□□□□□ -1.06
USP30-210ENST00000539121 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
USP30-210ENST00000539121 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
USP30-210ENST00000539121 BRIP1Q9BX63 1249 aa8.43□□□□□ -1.06
USP30-210ENST00000539121 NPC1L1Q9UHC9 1359 aa8.43□□□□□ -1.06
USP30-210ENST00000539121 GNAT3A8MTJ3 354 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 PDE6BP35913 854 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 IL6STP40189 918 aaPredicted RBP8.42□□□□□ -1.06
USP30-210ENST00000539121 TEFQ10587 303 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 DPY19L2Q6NUT2 758 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 ZNF790Q6PG37 636 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 KIF7Q2M1P5 1343 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 CCDC88AQ3V6T2 1871 aa8.42□□□□□ -1.06
USP30-210ENST00000539121 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 LTBP3Q9NS15 1303 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
USP30-210ENST00000539121 NFKBIEO00221 500 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 CANXP27824 592 aaKnown RBP8.41□□□□□ -1.06
USP30-210ENST00000539121 PRELPP51888 382 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 RASSF7Q02833 373 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
USP30-210ENST00000539121 IL17REQ8NFR9 667 aa8.41□□□□□ -1.06
USP30-210ENST00000539121 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
USP30-210ENST00000539121 DICER1Q9UPY3 1922 aaKnown RBP8.41□□□□□ -1.06
USP30-210ENST00000539121 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.06
USP30-210ENST00000539121 HTRA3P83110 453 aa8.4□□□□□ -1.06
USP30-210ENST00000539121 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
USP30-210ENST00000539121 TBC1D9BQ66K14 1250 aa8.4□□□□□ -1.06
USP30-210ENST00000539121 FMNL2Q96PY5 1086 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms