RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
SEMA4D-221ENST00000537934 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
SEMA4D-221ENST00000537934 FLT4P35916 1363 aa13.73□□□□□ -0.21
SEMA4D-221ENST00000537934 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
SEMA4D-221ENST00000537934 CDC45O75419 566 aa13.72□□□□□ -0.21
SEMA4D-221ENST00000537934 PHF14O94880 888 aa13.72□□□□□ -0.21
SEMA4D-221ENST00000537934 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
SEMA4D-221ENST00000537934 CTNNA3Q9UI47 895 aa13.72□□□□□ -0.21
SEMA4D-221ENST00000537934 BRINP3Q76B58 766 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 NFAT5O94916 1531 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 HOXC9P31274 260 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 MPNDQ8N594 471 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
SEMA4D-221ENST00000537934 LTN1O94822 1766 aa13.71□□□□□ -0.22
SEMA4D-221ENST00000537934 ADCY5O95622 1261 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 KIAA1524Q8TCG1 905 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 TERF2Q15554 542 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 TULP2O00295 520 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-221ENST00000537934 ST18O60284 1047 aa13.69□□□□□ -0.22
SEMA4D-221ENST00000537934 GCP02774 474 aa13.69□□□□□ -0.22
SEMA4D-221ENST00000537934 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 ALS2Q96Q42 1657 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 TPM3P06753 285 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 CALCOCO1Q9P1Z2 691 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 KCNH5Q8NCM2 988 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 EYA1Q99502 592 aa13.68□□□□□ -0.22
SEMA4D-221ENST00000537934 PXDNQ92626 1479 aa13.67□□□□□ -0.22
SEMA4D-221ENST00000537934 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-221ENST00000537934 FAM193AP78312 1265 aa13.67□□□□□ -0.22
SEMA4D-221ENST00000537934 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-221ENST00000537934 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
SEMA4D-221ENST00000537934 SLIT3O75094 1523 aa13.66□□□□□ -0.22
SEMA4D-221ENST00000537934 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
SEMA4D-221ENST00000537934 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-221ENST00000537934 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-221ENST00000537934 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
SEMA4D-221ENST00000537934 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 BRD1O95696 1058 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 KDM4AO75164 1064 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 CAPN2P17655 700 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 IP6K1Q92551 441 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
SEMA4D-221ENST00000537934 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 KCNF1Q9H3M0 494 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 PYCARDQ9ULZ3 195 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 KRT222Q8N1A0 295 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 USHBP1Q8N6Y0 703 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
SEMA4D-221ENST00000537934 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 GSPT1P15170 499 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
SEMA4D-221ENST00000537934 KDRP35968 1356 aa13.62□□□□□ -0.23
SEMA4D-221ENST00000537934 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
SEMA4D-221ENST00000537934 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-221ENST00000537934 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-221ENST00000537934 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-221ENST00000537934 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 FAM53CQ9NYF3 392 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 NBPF6Q5VWK0 638 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 NBPF4Q96M43 638 aa13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-221ENST00000537934 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 TRIM6-TRIM34B2RNG4 842 aa13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-221ENST00000537934 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms