RNA–Protein interactions for RNA: ENST00000537380.1

CIITA-203, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best)

Gene CIITA, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-203ENST00000537380 NFATC2IPQ8NCF5 419 aa12.02□□□□□ -0.49
CIITA-203ENST00000537380 SYTL4Q96C24 671 aaPredicted RBP12.02□□□□□ -0.49
CIITA-203ENST00000537380 SPON1Q9HCB6 807 aa12.02□□□□□ -0.49
CIITA-203ENST00000537380 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
CIITA-203ENST00000537380 MIS18AQ9NYP9 233 aa12.02□□□□□ -0.49
CIITA-203ENST00000537380 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
CIITA-203ENST00000537380 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
CIITA-203ENST00000537380 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
CIITA-203ENST00000537380 API5Q9BZZ5 524 aaKnown RBP12.01□□□□□ -0.49
CIITA-203ENST00000537380 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
CIITA-203ENST00000537380 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
CIITA-203ENST00000537380 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
CIITA-203ENST00000537380 C5P01031 1676 aa12□□□□□ -0.49
CIITA-203ENST00000537380 PLIN1O60240 522 aa12□□□□□ -0.49
CIITA-203ENST00000537380 DZIP1LQ8IYY4 767 aaKnown RBP12□□□□□ -0.49
CIITA-203ENST00000537380 PIGBQ92521 554 aa12□□□□□ -0.49
CIITA-203ENST00000537380 STK31Q9BXU1 1019 aa12□□□□□ -0.49
CIITA-203ENST00000537380 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
CIITA-203ENST00000537380 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
CIITA-203ENST00000537380 TRIM27P14373 513 aa11.99□□□□□ -0.49
CIITA-203ENST00000537380 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
CIITA-203ENST00000537380 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
CIITA-203ENST00000537380 FMNL2Q96PY5 1086 aa11.99□□□□□ -0.49
CIITA-203ENST00000537380 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
CIITA-203ENST00000537380 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
CIITA-203ENST00000537380 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
CIITA-203ENST00000537380 CICQ96RK0 1608 aaPredicted RBP11.99□□□□□ -0.49
CIITA-203ENST00000537380 ABCC4O15439 1325 aa11.98□□□□□ -0.49
CIITA-203ENST00000537380 ELL2O00472 640 aaPredicted RBP11.98□□□□□ -0.49
CIITA-203ENST00000537380 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
CIITA-203ENST00000537380 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
CIITA-203ENST00000537380 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
CIITA-203ENST00000537380 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
CIITA-203ENST00000537380 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
CIITA-203ENST00000537380 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
CIITA-203ENST00000537380 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
CIITA-203ENST00000537380 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
CIITA-203ENST00000537380 C20orf194Q5TEA3 1177 aa11.97□□□□□ -0.49
CIITA-203ENST00000537380 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
CIITA-203ENST00000537380 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
CIITA-203ENST00000537380 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
CIITA-203ENST00000537380 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
CIITA-203ENST00000537380 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
CIITA-203ENST00000537380 KCNQ3O43525 872 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
CIITA-203ENST00000537380 SLC15A2Q16348 729 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 EXOC6Q8TAG9 804 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
CIITA-203ENST00000537380 CRBNQ96SW2 442 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
CIITA-203ENST00000537380 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
CIITA-203ENST00000537380 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.5
CIITA-203ENST00000537380 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 RLBP1P12271 317 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 HMGB2P26583 209 aaKnown RBP11.95□□□□□ -0.5
CIITA-203ENST00000537380 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
CIITA-203ENST00000537380 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
CIITA-203ENST00000537380 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 DDX21Q9NR30 783 aaKnown RBP eCLIP11.95□□□□□ -0.5
CIITA-203ENST00000537380 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 HYPKQ9NX55 129 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
CIITA-203ENST00000537380 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
CIITA-203ENST00000537380 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
CIITA-203ENST00000537380 FLIIQ13045 1269 aa11.94□□□□□ -0.5
CIITA-203ENST00000537380 SLC39A6Q13433 755 aa11.94□□□□□ -0.5
CIITA-203ENST00000537380 LAMB4A4D0S4 1761 aa11.94□□□□□ -0.5
CIITA-203ENST00000537380 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
CIITA-203ENST00000537380 KCNQ4P56696 695 aa11.93□□□□□ -0.5
CIITA-203ENST00000537380 SIK1P57059 783 aa11.93□□□□□ -0.5
CIITA-203ENST00000537380 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
CIITA-203ENST00000537380 TJP1Q07157 1748 aa11.93□□□□□ -0.5
CIITA-203ENST00000537380 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
CIITA-203ENST00000537380 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
CIITA-203ENST00000537380 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
CIITA-203ENST00000537380 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
CIITA-203ENST00000537380 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
CIITA-203ENST00000537380 PDIA6Q15084 440 aa11.91□□□□□ -0.5
CIITA-203ENST00000537380 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
CIITA-203ENST00000537380 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
CIITA-203ENST00000537380 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
CIITA-203ENST00000537380 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
CIITA-203ENST00000537380 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
CIITA-203ENST00000537380 DDX58O95786 925 aaKnown RBP11.9□□□□□ -0.5
CIITA-203ENST00000537380 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
CIITA-203ENST00000537380 ITPK1Q13572 414 aa11.9□□□□□ -0.5
CIITA-203ENST00000537380 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
CIITA-203ENST00000537380 ZBTB40Q9NUA8 1239 aa11.9□□□□□ -0.5
CIITA-203ENST00000537380 ATP10DQ9P241 1426 aa11.9□□□□□ -0.5
CIITA-203ENST00000537380 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
CIITA-203ENST00000537380 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
CIITA-203ENST00000537380 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
CIITA-203ENST00000537380 STARD3NLO95772 234 aa11.89□□□□□ -0.51
CIITA-203ENST00000537380 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
CIITA-203ENST00000537380 G2E3Q7L622 706 aa11.89□□□□□ -0.51
CIITA-203ENST00000537380 ITPRIPQ8IWB1 547 aa11.89□□□□□ -0.51
CIITA-203ENST00000537380 MTFR1LQ9H019 292 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms