RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TBC1D32Q96NH3 1257 aa28.27■■■□□ 2.12
HMGA2-206ENST00000536545 STRN4Q9NRL3 753 aa28.27■■■□□ 2.12
HMGA2-206ENST00000536545 PLEKHM2Q8IWE5 1019 aa28.26■■■□□ 2.11
HMGA2-206ENST00000536545 UPF2Q9HAU5 1272 aaKnown RBP28.26■■■□□ 2.11
HMGA2-206ENST00000536545 ATP8B2P98198 1209 aa28.25■■■□□ 2.11
HMGA2-206ENST00000536545 UBR2Q8IWV8 1755 aa28.24■■■□□ 2.11
HMGA2-206ENST00000536545 CABP4P57796 275 aa28.24■■■□□ 2.11
HMGA2-206ENST00000536545 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
HMGA2-206ENST00000536545 TTC5Q8N0Z6 440 aa28.24■■■□□ 2.11
HMGA2-206ENST00000536545 PNMA6EA0A0J9YXQ4 647 aa28.23■■■□□ 2.11
HMGA2-206ENST00000536545 EVA1CP58658 441 aa28.23■■■□□ 2.11
HMGA2-206ENST00000536545 KSR2Q6VAB6 950 aa28.23■■■□□ 2.11
HMGA2-206ENST00000536545 FMNL2Q96PY5 1086 aa28.22■■■□□ 2.11
HMGA2-206ENST00000536545 MAP3K2Q9Y2U5 619 aa28.22■■■□□ 2.11
HMGA2-206ENST00000536545 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
HMGA2-206ENST00000536545 TOGARAM1Q9Y4F4 1720 aa28.2■■■□□ 2.11
HMGA2-206ENST00000536545 PLCH1Q4KWH8 1693 aa28.2■■■□□ 2.11
HMGA2-206ENST00000536545 ERVV-2B6SEH9 535 aa28.2■■■□□ 2.11
HMGA2-206ENST00000536545 ALDH1L1O75891 902 aa28.2■■■□□ 2.11
HMGA2-206ENST00000536545 IBTKQ9P2D0 1353 aaPredicted RBP28.19■■■□□ 2.1
HMGA2-206ENST00000536545 SMARCA5O60264 1052 aaPredicted RBP28.19■■■□□ 2.1
HMGA2-206ENST00000536545 GSPT1P15170 499 aaKnown RBP28.19■■■□□ 2.1
HMGA2-206ENST00000536545 C16orf71Q8IYS4 520 aaPredicted RBP28.19■■■□□ 2.1
HMGA2-206ENST00000536545 OTUD7AQ8TE49 926 aaPredicted RBP28.19■■■□□ 2.1
HMGA2-206ENST00000536545 KCPQ6ZWJ8 1503 aa28.19■■■□□ 2.1
HMGA2-206ENST00000536545 BTG4Q9NY30 223 aa28.19■■■□□ 2.1
HMGA2-206ENST00000536545 DISP2A7MBM2 1401 aa28.18■■■□□ 2.1
HMGA2-206ENST00000536545 TTC22Q5TAA0 569 aa28.18■■■□□ 2.1
HMGA2-206ENST00000536545 DDX58O95786 925 aaKnown RBP28.17■■■□□ 2.1
HMGA2-206ENST00000536545 NBPF7P0C2Y1 421 aaPredicted RBP28.17■■■□□ 2.1
HMGA2-206ENST00000536545 LRP10Q7Z4F1 713 aa28.17■■■□□ 2.1
HMGA2-206ENST00000536545 SSH3Q8TE77 659 aa28.17■■■□□ 2.1
HMGA2-206ENST00000536545 EXOC6BQ9Y2D4 811 aa28.17■■■□□ 2.1
HMGA2-206ENST00000536545 APBB1O00213 710 aa28.16■■■□□ 2.1
HMGA2-206ENST00000536545 MFAP1P55081 439 aaKnown RBP28.16■■■□□ 2.1
HMGA2-206ENST00000536545 TNS2Q63HR2 1409 aa28.16■■■□□ 2.1
HMGA2-206ENST00000536545 POLA2Q14181 598 aa28.16■■■□□ 2.1
HMGA2-206ENST00000536545 PHLPP1O60346 1717 aa28.15■■■□□ 2.1
HMGA2-206ENST00000536545 USP16Q9Y5T5 823 aa28.14■■■□□ 2.09
HMGA2-206ENST00000536545 WNK3Q9BYP7 1800 aa28.13■■■□□ 2.09
HMGA2-206ENST00000536545 LINS1Q8NG48 757 aa28.13■■■□□ 2.09
HMGA2-206ENST00000536545 TBC1D9Q6ZT07 1266 aa28.12■■■□□ 2.09
HMGA2-206ENST00000536545 PPP1R42Q7Z4L9 355 aa28.12■■■□□ 2.09
HMGA2-206ENST00000536545 DDX54Q8TDD1 881 aaKnown RBP28.12■■■□□ 2.09
HMGA2-206ENST00000536545 LRRCC1Q9C099 1032 aa28.12■■■□□ 2.09
HMGA2-206ENST00000536545 SALL3Q9BXA9 1300 aa28.12■■■□□ 2.09
HMGA2-206ENST00000536545 CDC45O75419 566 aa28.11■■■□□ 2.09
HMGA2-206ENST00000536545 XAGE3Q8WTP9 111 aa28.11■■■□□ 2.09
HMGA2-206ENST00000536545 C22orf23Q9BZE7 217 aa28.11■■■□□ 2.09
HMGA2-206ENST00000536545 MYL6BP14649 208 aa28.11■■■□□ 2.09
HMGA2-206ENST00000536545 AIMP1Q12904 312 aaKnown RBP28.11■■■□□ 2.09
HMGA2-206ENST00000536545 OSBPL3Q9H4L5 887 aa28.11■■■□□ 2.09
HMGA2-206ENST00000536545 UTYO14607 1347 aa28.1■■■□□ 2.09
HMGA2-206ENST00000536545 MTX1Q13505 466 aa28.1■■■□□ 2.09
HMGA2-206ENST00000536545 CWF19L2Q2TBE0 894 aaKnown RBP28.1■■■□□ 2.09
HMGA2-206ENST00000536545 ERBB4Q15303 1308 aa28.1■■■□□ 2.09
HMGA2-206ENST00000536545 TUBGCP6Q96RT7 1819 aa28.09■■■□□ 2.09
HMGA2-206ENST00000536545 SLC4A3P48751 1232 aa28.09■■■□□ 2.09
HMGA2-206ENST00000536545 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
HMGA2-206ENST00000536545 USP35Q9P2H5 1018 aa28.09■■■□□ 2.09
HMGA2-206ENST00000536545 ARFGEF2Q9Y6D5 1785 aa28.08■■■□□ 2.09
HMGA2-206ENST00000536545 COPS6Q7L5N1 327 aa28.08■■■□□ 2.09
HMGA2-206ENST00000536545 RIC3Q7Z5B4 369 aa28.07■■■□□ 2.08
HMGA2-206ENST00000536545 C9orf78Q9NZ63 289 aaPredicted RBP28.07■■■□□ 2.08
HMGA2-206ENST00000536545 DAXXQ9UER7 740 aaPredicted RBP28.07■■■□□ 2.08
HMGA2-206ENST00000536545 LRP6O75581 1613 aa28.07■■■□□ 2.08
HMGA2-206ENST00000536545 SRGAP3O43295 1099 aa28.06■■■□□ 2.08
HMGA2-206ENST00000536545 IGKV5-2P06315 115 aa28.06■■■□□ 2.08
HMGA2-206ENST00000536545 PDE1AP54750 535 aa28.06■■■□□ 2.08
HMGA2-206ENST00000536545 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
HMGA2-206ENST00000536545 GRM8O00222 908 aa28.06■■■□□ 2.08
HMGA2-206ENST00000536545 RAB11FIP3O75154 756 aa28.05■■■□□ 2.08
HMGA2-206ENST00000536545 RBM25P49756 843 aaKnown RBP28.05■■■□□ 2.08
HMGA2-206ENST00000536545 METTL22Q9BUU2 404 aaPredicted RBP28.05■■■□□ 2.08
HMGA2-206ENST00000536545 HDAC5Q9UQL6 1122 aa28.05■■■□□ 2.08
HMGA2-206ENST00000536545 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
HMGA2-206ENST00000536545 NEURL1BA8MQ27 555 aa28.03■■■□□ 2.08
HMGA2-206ENST00000536545 SDSP20132 328 aa28.03■■■□□ 2.08
HMGA2-206ENST00000536545 NEXNQ0ZGT2 675 aa28.02■■■□□ 2.08
HMGA2-206ENST00000536545 BECN1Q14457 450 aa28.02■■■□□ 2.08
HMGA2-206ENST00000536545 ANKRD13DQ6ZTN6 518 aa28.02■■■□□ 2.08
HMGA2-206ENST00000536545 NUP188Q5SRE5 1749 aa28.02■■■□□ 2.08
HMGA2-206ENST00000536545 SURF6O75683 361 aaKnown RBP28.01■■■□□ 2.08
HMGA2-206ENST00000536545 ITGB4P16144 1822 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 NBPF26B4DH59 902 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 MX1P20591 662 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 NBPF14Q5TI25 921 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 NBPF10Q6P3W6 841 aaKnown RBP28.01■■■□□ 2.07
HMGA2-206ENST00000536545 NBPF15Q8N660 670 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 SUCLG2Q96I99 432 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 TMOD3Q9NYL9 352 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 STAP2Q9UGK3 403 aa28.01■■■□□ 2.07
HMGA2-206ENST00000536545 KAZALD1Q96I82 304 aa28■■■□□ 2.07
HMGA2-206ENST00000536545 MYD88Q99836 296 aa28■■■□□ 2.07
HMGA2-206ENST00000536545 AFDNP55196 1824 aaKnown RBP28■■■□□ 2.07
HMGA2-206ENST00000536545 AOX1Q06278 1338 aa27.99■■■□□ 2.07
HMGA2-206ENST00000536545 GCKRQ14397 625 aa27.99■■■□□ 2.07
HMGA2-206ENST00000536545 EIF5BO60841 1220 aaKnown RBP27.98■■■□□ 2.07
HMGA2-206ENST00000536545 HSP90AB4PQ58FF6 505 aa27.98■■■□□ 2.07
HMGA2-206ENST00000536545 RHPN1Q8TCX5 695 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms