RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 DDIT3P35638 169 aa26.33■■□□□ 1.81
TRIM3-214ENST00000536344 BABAM1Q9NWV8 329 aa26.33■■□□□ 1.81
TRIM3-214ENST00000536344 FAM208AQ9UK61 1670 aaKnown RBP26.32■■□□□ 1.8
TRIM3-214ENST00000536344 KDM6AO15550 1401 aaPredicted RBP26.32■■□□□ 1.8
TRIM3-214ENST00000536344 EVA1CP58658 441 aa26.32■■□□□ 1.8
TRIM3-214ENST00000536344 CRYBG1Q9Y4K1 1723 aa26.31■■□□□ 1.8
TRIM3-214ENST00000536344 GIGYF1O75420 1035 aaPredicted RBP26.31■■□□□ 1.8
TRIM3-214ENST00000536344 IFNL2Q8IZJ0 200 aa26.31■■□□□ 1.8
TRIM3-214ENST00000536344 DDX54Q8TDD1 881 aaKnown RBP26.31■■□□□ 1.8
TRIM3-214ENST00000536344 PI4KAP2A4QPH2 592 aa26.31■■□□□ 1.8
TRIM3-214ENST00000536344 AIMP1Q12904 312 aaKnown RBP26.31■■□□□ 1.8
TRIM3-214ENST00000536344 PI4KAP1Q8N8J0 262 aa26.31■■□□□ 1.8
TRIM3-214ENST00000536344 CCT4P50991 539 aaKnown RBP26.3■■□□□ 1.8
TRIM3-214ENST00000536344 ATP10DQ9P241 1426 aa26.3■■□□□ 1.8
TRIM3-214ENST00000536344 CPDO75976 1380 aa26.3■■□□□ 1.8
TRIM3-214ENST00000536344 ISY1Q9ULR0 285 aaKnown RBP26.3■■□□□ 1.8
TRIM3-214ENST00000536344 ANKRD44Q8N8A2 993 aa26.3■■□□□ 1.8
TRIM3-214ENST00000536344 SLC52A2Q9HAB3 445 aa26.3■■□□□ 1.8
TRIM3-214ENST00000536344 R3HCC1Q9Y3T6 440 aaKnown RBP26.3■■□□□ 1.8
TRIM3-214ENST00000536344 OFD1O75665 1012 aa26.29■■□□□ 1.8
TRIM3-214ENST00000536344 OTUD7AQ8TE49 926 aaPredicted RBP26.29■■□□□ 1.8
TRIM3-214ENST00000536344 GCC1Q96CN9 775 aa26.29■■□□□ 1.8
TRIM3-214ENST00000536344 ZNF790Q6PG37 636 aa26.28■■□□□ 1.8
TRIM3-214ENST00000536344 ZSCAN30Q86W11 494 aa26.28■■□□□ 1.8
TRIM3-214ENST00000536344 WDR17Q8IZU2 1322 aa26.28■■□□□ 1.8
TRIM3-214ENST00000536344 KDM3BQ7LBC6 1761 aa26.28■■□□□ 1.8
TRIM3-214ENST00000536344 MYL6BP14649 208 aa26.27■■□□□ 1.8
TRIM3-214ENST00000536344 NASPP49321 788 aaPredicted RBP26.27■■□□□ 1.8
TRIM3-214ENST00000536344 ZNF496Q96IT1 587 aaPredicted RBP26.26■■□□□ 1.79
TRIM3-214ENST00000536344 LRRFIP2Q9Y608 721 aaKnown RBP26.26■■□□□ 1.79
TRIM3-214ENST00000536344 EXOC6BQ9Y2D4 811 aa26.26■■□□□ 1.79
TRIM3-214ENST00000536344 CD2BP2O95400 341 aaKnown RBP26.25■■□□□ 1.79
TRIM3-214ENST00000536344 KAT6BQ8WYB5 2073 aa26.25■■□□□ 1.79
TRIM3-214ENST00000536344 BTG4Q9NY30 223 aa26.25■■□□□ 1.79
TRIM3-214ENST00000536344 PNMA6EA0A0J9YXQ4 647 aa26.24■■□□□ 1.79
TRIM3-214ENST00000536344 USP44Q9H0E7 712 aa26.24■■□□□ 1.79
TRIM3-214ENST00000536344 DCTPP1Q9H773 170 aa26.24■■□□□ 1.79
TRIM3-214ENST00000536344 GNAI2P04899 355 aa26.23■■□□□ 1.79
TRIM3-214ENST00000536344 CCDC173Q0VFZ6 552 aa26.23■■□□□ 1.79
TRIM3-214ENST00000536344 MSNP26038 577 aaKnown RBP26.23■■□□□ 1.79
TRIM3-214ENST00000536344 CABP4P57796 275 aa26.23■■□□□ 1.79
TRIM3-214ENST00000536344 RPAP2Q8IXW5 612 aaPredicted RBP26.23■■□□□ 1.79
TRIM3-214ENST00000536344 PPP1R9BQ96SB3 815 aa26.23■■□□□ 1.79
TRIM3-214ENST00000536344 COL5A2P05997 1499 aaPredicted RBP26.23■■□□□ 1.79
TRIM3-214ENST00000536344 PIP4K2BP78356 416 aa26.23■■□□□ 1.79
TRIM3-214ENST00000536344 NBPF7P0C2Y1 421 aaPredicted RBP26.22■■□□□ 1.79
TRIM3-214ENST00000536344 RAB3GAP1Q15042 981 aa26.22■■□□□ 1.79
TRIM3-214ENST00000536344 ZCRB1Q8TBF4 217 aaKnown RBP26.22■■□□□ 1.79
TRIM3-214ENST00000536344 DBF4Q9UBU7 674 aaPredicted RBP26.22■■□□□ 1.79
TRIM3-214ENST00000536344 HSP90AB1P08238 724 aaKnown RBP26.22■■□□□ 1.79
TRIM3-214ENST00000536344 USP16Q9Y5T5 823 aa26.22■■□□□ 1.79
TRIM3-214ENST00000536344 DCAF5Q96JK2 942 aa26.21■■□□□ 1.79
TRIM3-214ENST00000536344 DNAAF4Q8WXU2 420 aa26.21■■□□□ 1.79
TRIM3-214ENST00000536344 GBP4Q96PP9 640 aa26.21■■□□□ 1.79
TRIM3-214ENST00000536344 PRDM10Q9NQV6 1147 aa26.21■■□□□ 1.79
TRIM3-214ENST00000536344 MAP3K2Q9Y2U5 619 aa26.21■■□□□ 1.79
TRIM3-214ENST00000536344 SRCIN1Q9C0H9 1055 aa26.2■■□□□ 1.79
TRIM3-214ENST00000536344 CWF19L2Q2TBE0 894 aaKnown RBP26.2■■□□□ 1.78
TRIM3-214ENST00000536344 TTC5Q8N0Z6 440 aa26.2■■□□□ 1.78
TRIM3-214ENST00000536344 ADAMTS2O95450 1211 aa26.19■■□□□ 1.78
TRIM3-214ENST00000536344 SSFA2P28290 1259 aa26.19■■□□□ 1.78
TRIM3-214ENST00000536344 UBTFL1P0CB47 393 aaPredicted RBP26.19■■□□□ 1.78
TRIM3-214ENST00000536344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.19■■□□□ 1.78
TRIM3-214ENST00000536344 ADCY9O60503 1353 aa26.18■■□□□ 1.78
TRIM3-214ENST00000536344 HOXB7P09629 217 aa26.18■■□□□ 1.78
TRIM3-214ENST00000536344 TSHZ3Q63HK5 1081 aa26.18■■□□□ 1.78
TRIM3-214ENST00000536344 IL2RBP14784 551 aa26.18■■□□□ 1.78
TRIM3-214ENST00000536344 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
TRIM3-214ENST00000536344 CACNA1FO60840 1977 aa26.18■■□□□ 1.78
TRIM3-214ENST00000536344 RBM42Q9BTD8 480 aaKnown RBP26.17■■□□□ 1.78
TRIM3-214ENST00000536344 PTCD1O75127 700 aaKnown RBP26.17■■□□□ 1.78
TRIM3-214ENST00000536344 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.17■■□□□ 1.78
TRIM3-214ENST00000536344 SCN11AQ9UI33 1791 aa26.16■■□□□ 1.78
TRIM3-214ENST00000536344 GNAI3P08754 354 aa26.16■■□□□ 1.78
TRIM3-214ENST00000536344 BEND3Q5T5X7 828 aa26.16■■□□□ 1.78
TRIM3-214ENST00000536344 PDIA6Q15084 440 aa26.16■■□□□ 1.78
TRIM3-214ENST00000536344 ZHX1Q9UKY1 873 aaPredicted RBP26.16■■□□□ 1.78
TRIM3-214ENST00000536344 SIPA1L3O60292 1781 aaPredicted RBP26.15■■□□□ 1.78
TRIM3-214ENST00000536344 PLEKHM2Q8IWE5 1019 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 HEG1Q9ULI3 1381 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 OVOS2A0A0G2JMS6 1433 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 UQCRHLA0A096LP55 91 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 UQCRHP07919 91 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 CARD10Q9BWT7 1032 aa26.15■■□□□ 1.78
TRIM3-214ENST00000536344 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.15■■□□□ 1.78
TRIM3-214ENST00000536344 SKOR2Q2VWA4 1001 aaPredicted RBP26.14■■□□□ 1.78
TRIM3-214ENST00000536344 ABCA3Q99758 1704 aa26.14■■□□□ 1.77
TRIM3-214ENST00000536344 NUTM2BA6NNL0 878 aaPredicted RBP26.14■■□□□ 1.77
TRIM3-214ENST00000536344 NUTM2EB1AL46 878 aaPredicted RBP26.14■■□□□ 1.77
TRIM3-214ENST00000536344 NUTM2AQ8IVF1 878 aaPredicted RBP26.14■■□□□ 1.77
TRIM3-214ENST00000536344 JARID2Q92833 1246 aaPredicted RBP26.14■■□□□ 1.77
TRIM3-214ENST00000536344 DDX49Q9Y6V7 483 aaKnown RBP26.14■■□□□ 1.77
TRIM3-214ENST00000536344 ROBO1Q9Y6N7 1651 aa26.13■■□□□ 1.77
TRIM3-214ENST00000536344 HMMRO75330 724 aa26.13■■□□□ 1.77
TRIM3-214ENST00000536344 NHSL1Q5SYE7 1610 aa26.13■■□□□ 1.77
TRIM3-214ENST00000536344 GSPT1P15170 499 aaKnown RBP26.13■■□□□ 1.77
TRIM3-214ENST00000536344 AK9Q5TCS8 1911 aa26.12■■□□□ 1.77
TRIM3-214ENST00000536344 KIF2CQ99661 725 aa26.12■■□□□ 1.77
TRIM3-214ENST00000536344 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
TRIM3-214ENST00000536344 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms