RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 C1orf216Q8TAB5 229 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 NLRP7Q8WX94 980 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 PKNOX2Q96KN3 472 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
MDM1-206ENST00000536313 GPATCH8Q9UKJ3 1502 aaKnown RBP6.59□□□□□ -1.35
MDM1-206ENST00000536313 EEA1Q15075 1411 aa6.59□□□□□ -1.36
MDM1-206ENST00000536313 MIA2Q96PC5 1412 aa6.59□□□□□ -1.36
MDM1-206ENST00000536313 MAPK1P28482 360 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 PLEKHG6Q3KR16 790 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 PRPF38BQ5VTL8 546 aaKnown RBP6.58□□□□□ -1.36
MDM1-206ENST00000536313 ZSCAN29Q8IWY8 852 aaPredicted RBP6.58□□□□□ -1.36
MDM1-206ENST00000536313 PMFBP1Q8TBY8 1022 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 PXYLP1Q8TE99 480 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 RBM33Q96EV2 1170 aaKnown RBP6.58□□□□□ -1.36
MDM1-206ENST00000536313 CAPN10Q9HC96 672 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 COL4A3BPQ9Y5P4 624 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 PZPP20742 1482 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 FAM135BQ49AJ0 1406 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 KIAA1107Q9UPP5 1409 aa6.58□□□□□ -1.36
MDM1-206ENST00000536313 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
MDM1-206ENST00000536313 INO80Q9ULG1 1556 aaPredicted RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 ZNF644Q9H582 1327 aaPredicted RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 SUPT6HQ7KZ85 1726 aaKnown RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 FOXD4L6Q3SYB3 417 aaPredicted RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 FOXD4L3Q6VB84 417 aaPredicted RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 JAZF1Q86VZ6 243 aa6.57□□□□□ -1.36
MDM1-206ENST00000536313 EVI5LQ96CN4 794 aa6.57□□□□□ -1.36
MDM1-206ENST00000536313 IRF2BPLQ9H1B7 796 aa6.57□□□□□ -1.36
MDM1-206ENST00000536313 HMX1Q9NP08 348 aaPredicted RBP6.57□□□□□ -1.36
MDM1-206ENST00000536313 DCTN4Q9UJW0 460 aa6.57□□□□□ -1.36
MDM1-206ENST00000536313 UGGT1Q9NYU2 1555 aa6.57□□□□□ -1.36
MDM1-206ENST00000536313 FAM135AQ9P2D6 1515 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 NLRP1Q9C000 1473 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L15C9J2P7 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L10C9JJH3 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L13C9JLJ4 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L12C9JPN9 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L11C9JVI0 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L21D6R901 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L18D6R9N7 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L22D6RA61 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L17D6RBQ6 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L19D6RCP7 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L20D6RJB6 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 KIF3BO15066 747 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 MAP3K7O43318 606 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 APLP1P51693 650 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 USP17L24Q0WX57 530 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 PROX2Q3B8N5 592 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 NUTM2DQ5VT03 806 aaPredicted RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 NUTM2AQ8IVF1 878 aaPredicted RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 MRPL50Q8N5N7 158 aaKnown RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 KCTD12Q96CX2 325 aaKnown RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 NBPF3Q9H094 633 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 OSBPL2Q9H1P3 480 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 CCSER2Q9H7U1 834 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 PCDH12Q9NPG4 1184 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 CFDP1Q9UEE9 299 aaPredicted RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 RABGEF1Q9UJ41 708 aa6.56□□□□□ -1.36
MDM1-206ENST00000536313 DHX29Q7Z478 1369 aaKnown RBP6.56□□□□□ -1.36
MDM1-206ENST00000536313 WASHC2CQ9Y4E1 1318 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 DEPDC5O75140 1603 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 STRCP1A6NGW2 1772 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 MOXD2PA6NHM9 499 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 PLEKHM2Q8IWE5 1019 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 CCDC146Q8IYE0 955 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 FAM200AQ8TCP9 573 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 MAF1Q9H063 256 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 HCSTQ9UBK5 93 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 GABBR1Q9UBS5 961 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 CASKIN1Q8WXD9 1431 aa6.55□□□□□ -1.36
MDM1-206ENST00000536313 SETD1AO15047 1707 aaKnown RBP6.55□□□□□ -1.36
MDM1-206ENST00000536313 MBD5Q9P267 1494 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 POLR1AO95602 1720 aaPredicted RBP6.54□□□□□ -1.36
MDM1-206ENST00000536313 SYNMO15061 1565 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 USP17L3A6NCW0 530 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 USP17L4A6NCW7 530 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 GOLGA8CPA6NN73 597 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 H3BRB1 525 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 SH3BP5O60239 455 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 ICMTO60725 284 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 LTKP29376 864 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 ITGAEP38570 1179 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
MDM1-206ENST00000536313 FAM161AQ3B820 660 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 C4orf46Q504U0 113 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 ZFYVE27Q5T4F4 411 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 USP17L2Q6R6M4 530 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 TSHZ1Q6ZSZ6 1077 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 USP17L1Q7RTZ2 530 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 NUTM1Q86Y26 1132 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 TMEM87AQ8NBN3 555 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 RNF34Q969K3 372 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms