RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 AKAP4Q5JQC9 854 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
CHFR-211ENST00000535897 SLC52A2Q9HAB3 445 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 AFDNP55196 1824 aaKnown RBP10.95□□□□□ -0.66
CHFR-211ENST00000535897 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 ZC3H4Q9UPT8 1303 aaKnown RBP10.94□□□□□ -0.66
CHFR-211ENST00000535897 HSPA5P11021 654 aaKnown RBP10.94□□□□□ -0.66
CHFR-211ENST00000535897 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
CHFR-211ENST00000535897 NFIXQ14938 502 aa10.94□□□□□ -0.66
CHFR-211ENST00000535897 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
CHFR-211ENST00000535897 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
CHFR-211ENST00000535897 NARFQ9UHQ1 456 aa10.94□□□□□ -0.66
CHFR-211ENST00000535897 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
CHFR-211ENST00000535897 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 H0YIN7 160 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 SERPINB2P05120 415 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 HMOX1P09601 288 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 CYP19A1P11511 503 aaPredicted RBP10.93□□□□□ -0.66
CHFR-211ENST00000535897 IL13P35225 146 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 C2CD5Q86YS7 1000 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 ZBTB1Q9Y2K1 713 aa10.93□□□□□ -0.66
CHFR-211ENST00000535897 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
CHFR-211ENST00000535897 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
CHFR-211ENST00000535897 VEGFAP15692 232 aaPredicted RBP10.92□□□□□ -0.66
CHFR-211ENST00000535897 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
CHFR-211ENST00000535897 MRC1P22897 1456 aa10.92□□□□□ -0.66
CHFR-211ENST00000535897 CCDC88AQ3V6T2 1871 aa10.91□□□□□ -0.66
CHFR-211ENST00000535897 TTC5Q8N0Z6 440 aa10.91□□□□□ -0.66
CHFR-211ENST00000535897 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
CHFR-211ENST00000535897 ZNF330Q9Y3S2 320 aaPredicted RBP10.91□□□□□ -0.66
CHFR-211ENST00000535897 NRXN2Q9P2S2 1712 aa10.91□□□□□ -0.66
CHFR-211ENST00000535897 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.66
CHFR-211ENST00000535897 NPHP1O15259 732 aa10.9□□□□□ -0.66
CHFR-211ENST00000535897 STARD3NLO95772 234 aa10.9□□□□□ -0.66
CHFR-211ENST00000535897 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.669e-9■■□□□ 12.7
CHFR-211ENST00000535897 CLSPNQ9HAW4 1339 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 A0A087WZG4 1122 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 PRELPP51888 382 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
CHFR-211ENST00000535897 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 NPM2Q86SE8 214 aaKnown RBP10.89□□□□□ -0.67
CHFR-211ENST00000535897 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 UBR2Q8IWV8 1755 aa10.89□□□□□ -0.67
CHFR-211ENST00000535897 NFKBIEO00221 500 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 C21orf2O43822 256 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
CHFR-211ENST00000535897 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
CHFR-211ENST00000535897 PDE6BP35913 854 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
CHFR-211ENST00000535897 DIAPH1O60610 1272 aaKnown RBP10.87□□□□□ -0.67
CHFR-211ENST00000535897 TEFQ10587 303 aa10.87□□□□□ -0.67
CHFR-211ENST00000535897 TBC1D2BQ9UPU7 963 aa10.87□□□□□ -0.67
CHFR-211ENST00000535897 SCN7AQ01118 1682 aa10.87□□□□□ -0.67
CHFR-211ENST00000535897 CACNA1SQ13698 1873 aa10.87□□□□□ -0.67
CHFR-211ENST00000535897 ANKRD31Q8N7Z5 1873 aa10.87□□□□□ -0.67
CHFR-211ENST00000535897 COL11A2P13942 1736 aaPredicted RBP10.87□□□□□ -0.67
CHFR-211ENST00000535897 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
CHFR-211ENST00000535897 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
CHFR-211ENST00000535897 TBC1D9BQ66K14 1250 aa10.86□□□□□ -0.67
CHFR-211ENST00000535897 BRIP1Q9BX63 1249 aa10.86□□□□□ -0.67
CHFR-211ENST00000535897 TAOK3Q9H2K8 898 aa10.86□□□□□ -0.67
CHFR-211ENST00000535897 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 CC2D1BQ5T0F9 858 aaKnown RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
CHFR-211ENST00000535897 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
CHFR-211ENST00000535897 ZNF496Q96IT1 587 aaPredicted RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 TEX13AQ9BXU3 409 aaPredicted RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
CHFR-211ENST00000535897 DICER1Q9UPY3 1922 aaKnown RBP10.85□□□□□ -0.67
CHFR-211ENST00000535897 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
CHFR-211ENST00000535897 GNAT3A8MTJ3 354 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 ST5P78524 1137 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 ZNF790Q6PG37 636 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 SETDB2Q96T68 719 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
CHFR-211ENST00000535897 HEG1Q9ULI3 1381 aa10.84□□□□□ -0.67
CHFR-211ENST00000535897 POTECB2RU33 542 aa10.83□□□□□ -0.68
CHFR-211ENST00000535897 IL6STP40189 918 aaPredicted RBP10.83□□□□□ -0.68
CHFR-211ENST00000535897 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
CHFR-211ENST00000535897 DDNO94850 711 aaPredicted RBP10.82□□□□□ -0.68
CHFR-211ENST00000535897 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 SOGA3Q5TF21 947 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 PRPF40BQ6NWY9 871 aaKnown RBP10.82□□□□□ -0.68
CHFR-211ENST00000535897 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 CCER1Q8TC90 406 aaPredicted RBP10.82□□□□□ -0.68
CHFR-211ENST00000535897 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 LTBP3Q9NS15 1303 aa10.82□□□□□ -0.68
CHFR-211ENST00000535897 SLX4Q8IY92 1834 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms