RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
PHRF1-206ENST00000534320 TRIM5Q9C035 493 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 MNS1Q8NEH6 495 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 MAP3K19Q56UN5 1328 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 TRIM22Q8IYM9 498 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
PHRF1-206ENST00000534320 CCDC69A6NI79 296 aa20.33■□□□□ 0.85
PHRF1-206ENST00000534320 ZBTB3Q9H5J0 574 aa20.33■□□□□ 0.85
PHRF1-206ENST00000534320 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
PHRF1-206ENST00000534320 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.85
PHRF1-206ENST00000534320 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.84
PHRF1-206ENST00000534320 H0YHG0 523 aa20.33■□□□□ 0.84
PHRF1-206ENST00000534320 IFIT5Q13325 482 aaKnown RBP20.33■□□□□ 0.84
PHRF1-206ENST00000534320 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.84
PHRF1-206ENST00000534320 C8orf34Q49A92 452 aa20.33■□□□□ 0.84
PHRF1-206ENST00000534320 JMYQ8N9B5 988 aa20.33■□□□□ 0.84
PHRF1-206ENST00000534320 CCDC191Q8NCU4 936 aa20.33■□□□□ 0.84
PHRF1-206ENST00000534320 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 CTDP1Q9Y5B0 961 aaPredicted RBP20.32■□□□□ 0.84
PHRF1-206ENST00000534320 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 CCDC192P0DO97 292 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 ME1P48163 572 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 HSP90AB3PQ58FF7 597 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 MSH6P52701 1360 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
PHRF1-206ENST00000534320 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
PHRF1-206ENST00000534320 IL13P35225 146 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 TDO2P48775 406 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 IPO7O95373 1038 aaKnown RBP20.31■□□□□ 0.84
PHRF1-206ENST00000534320 PDE4CQ08493 712 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 TNMDQ9H2S6 317 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 LRP2BPQ9P2M1 347 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
PHRF1-206ENST00000534320 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
PHRF1-206ENST00000534320 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
PHRF1-206ENST00000534320 AIDAQ96BJ3 306 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 RAI14Q9P0K7 980 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 SDSP20132 328 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 CDKL5O76039 1030 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 ANKRD13DQ6ZTN6 518 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 RUFY1Q96T51 708 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 EXOC5O00471 708 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 HOXC9P31274 260 aa20.3■□□□□ 0.84
PHRF1-206ENST00000534320 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
PHRF1-206ENST00000534320 TRMT112Q9UI30 125 aaKnown RBP20.3■□□□□ 0.84
PHRF1-206ENST00000534320 CFAP45Q9UL16 551 aa20.29■□□□□ 0.84
PHRF1-206ENST00000534320 SH2B1Q9NRF2 756 aaPredicted RBP20.29■□□□□ 0.84
PHRF1-206ENST00000534320 MAP3K5Q99683 1374 aa20.29■□□□□ 0.84
PHRF1-206ENST00000534320 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
PHRF1-206ENST00000534320 TCEAL9Q9UHQ7 104 aa20.29■□□□□ 0.84
PHRF1-206ENST00000534320 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
PHRF1-206ENST00000534320 CFAP74Q9C0B2 1584 aa20.29■□□□□ 0.84
PHRF1-206ENST00000534320 NUP133Q8WUM0 1156 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 KDM5CP41229 1560 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 PDE1AP54750 535 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 TNPO1Q92973 898 aaKnown RBP20.28■□□□□ 0.84
PHRF1-206ENST00000534320 SSFA2P28290 1259 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 LIMCH1Q9UPQ0 1083 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
PHRF1-206ENST00000534320 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 SBNO2Q9Y2G9 1366 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
PHRF1-206ENST00000534320 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.84
PHRF1-206ENST00000534320 GCP02774 474 aa20.27■□□□□ 0.83
PHRF1-206ENST00000534320 UBAC1Q9BSL1 405 aa20.27■□□□□ 0.83
PHRF1-206ENST00000534320 PLXNC1O60486 1568 aa20.27■□□□□ 0.83
PHRF1-206ENST00000534320 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 YEATS2Q9ULM3 1422 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 RNF123Q5XPI4 1314 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 FERMT3Q86UX7 667 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 ABCF2Q9UG63 623 aa20.26■□□□□ 0.83
PHRF1-206ENST00000534320 IP6K1Q92551 441 aa20.25■□□□□ 0.83
PHRF1-206ENST00000534320 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
PHRF1-206ENST00000534320 GPTP24298 496 aa20.25■□□□□ 0.83
PHRF1-206ENST00000534320 CEP85Q6P2H3 762 aa20.25■□□□□ 0.83
PHRF1-206ENST00000534320 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
PHRF1-206ENST00000534320 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
PHRF1-206ENST00000534320 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
PHRF1-206ENST00000534320 ERCC4Q92889 916 aaPredicted RBP20.24■□□□□ 0.83
PHRF1-206ENST00000534320 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms