RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 PIK3C2GO75747 1445 aa7.94□□□□□ -1.14
CHKA-208ENST00000533910 PPEF1O14829 653 aaPredicted RBP7.93□□□□□ -1.14
CHKA-208ENST00000533910 FBXO45P0C2W1 286 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 SPSB2Q99619 263 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
CHKA-208ENST00000533910 PRDM9Q9NQV7 894 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 WASHC2AQ641Q2 1341 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 ZFYVE9O95405 1425 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 ADGRB1O14514 1584 aa7.93□□□□□ -1.14
CHKA-208ENST00000533910 C3P01024 1663 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 PIK3CDO00329 1044 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 LCE2BO14633 110 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
CHKA-208ENST00000533910 DESI1Q6ICB0 168 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 PBXIP1Q96AQ6 731 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 CARD11Q9BXL7 1154 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
CHKA-208ENST00000533910 SCAF11Q99590 1463 aaKnown RBP7.92□□□□□ -1.14
CHKA-208ENST00000533910 F12P00748 615 aaPredicted RBP7.91□□□□□ -1.14
CHKA-208ENST00000533910 JUNDP17535 347 aa7.91□□□□□ -1.14
CHKA-208ENST00000533910 CTHP32929 405 aa7.91□□□□□ -1.14
CHKA-208ENST00000533910 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
CHKA-208ENST00000533910 ARID4BQ4LE39 1312 aaPredicted RBP7.91□□□□□ -1.14
CHKA-208ENST00000533910 SETD1AO15047 1707 aaKnown RBP7.91□□□□□ -1.14
CHKA-208ENST00000533910 UBR1Q8IWV7 1749 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PRR20EP86478 221 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PRR20CP86479 221 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PRR20DP86480 221 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PRR20BP86481 221 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PRR20AP86496 221 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 PKDCCQ504Y2 493 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 ZNF697Q5TEC3 545 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 EMID1Q96A84 441 aaPredicted RBP7.9□□□□□ -1.14
CHKA-208ENST00000533910 FKBPLQ9UIM3 349 aa7.9□□□□□ -1.14
CHKA-208ENST00000533910 ARHGEF28Q8N1W1 1705 aaKnown RBP7.89□□□□□ -1.15
CHKA-208ENST00000533910 ASXL1Q8IXJ9 1541 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 A2ML1A8K2U0 1454 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 ADGRF5Q8IZF2 1346 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
CHKA-208ENST00000533910 NR1H3Q13133 447 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 DDX10Q13206 875 aaKnown RBP7.89□□□□□ -1.15
CHKA-208ENST00000533910 LIAT1Q6ZQX7 453 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
CHKA-208ENST00000533910 MAFBQ9Y5Q3 323 aaPredicted RBP7.89□□□□□ -1.15
CHKA-208ENST00000533910 ZMYM3Q14202 1370 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 DGAT1O75907 488 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 IDI1Q13907 227 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
CHKA-208ENST00000533910 MYOM1P52179 1685 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 ADAMTSL3P82987 1691 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 QRICH2Q9H0J4 1663 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 NRXN3Q9Y4C0 1643 aa7.88□□□□□ -1.15
CHKA-208ENST00000533910 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
CHKA-208ENST00000533910 EIF3AQ14152 1382 aaKnown RBP7.87□□□□□ -1.15
CHKA-208ENST00000533910 ST20-MTHFSA0A0A6YYL1 179 aa7.87□□□□□ -1.15
CHKA-208ENST00000533910 ZBBXA8MT70 800 aa7.87□□□□□ -1.15
CHKA-208ENST00000533910 PDE4CQ08493 712 aa7.87□□□□□ -1.15
CHKA-208ENST00000533910 ZNF787Q6DD87 383 aa7.87□□□□□ -1.15
CHKA-208ENST00000533910 TNRQ92752 1358 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 SBNO2Q9Y2G9 1366 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 RIMS1Q86UR5 1692 aaKnown RBP7.86□□□□□ -1.15
CHKA-208ENST00000533910 MLECQ14165 292 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 PTPRNQ16849 979 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 PNMA1Q8ND90 353 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 TESK2Q96S53 571 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 OCSTAMPQ9BR26 566 aa7.86□□□□□ -1.15
CHKA-208ENST00000533910 GZF1Q9H116 711 aaPredicted RBP7.86□□□□□ -1.15
CHKA-208ENST00000533910 ZNF142P52746 1687 aaPredicted RBP7.86□□□□□ -1.15
CHKA-208ENST00000533910 DISP3Q9P2K9 1392 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 SOX11P35716 441 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 PTCRAQ6ISU1 281 aaPredicted RBP7.85□□□□□ -1.15
CHKA-208ENST00000533910 DEPDC4Q8N2C3 294 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 FAM174AQ8TBP5 190 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 C14orf93Q9H972 538 aaKnown RBP7.85□□□□□ -1.15
CHKA-208ENST00000533910 KNDC1Q76NI1 1749 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 ALKQ9UM73 1620 aa7.85□□□□□ -1.15
CHKA-208ENST00000533910 ATP9BO43861 1147 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 GDF9O60383 454 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 DXOO77932 396 aaKnown RBP7.84□□□□□ -1.15
CHKA-208ENST00000533910 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 RPIAP49247 311 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 PLA2G2CQ5R387 149 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 ESF1Q9H501 851 aaKnown RBP7.84□□□□□ -1.15
CHKA-208ENST00000533910 RIMS2Q9UQ26 1411 aa7.84□□□□□ -1.15
CHKA-208ENST00000533910 SLIT1O75093 1534 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 ARHGAP23Q9P227 1491 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 TNFRSF10AO00220 468 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 CD2BP2O95400 341 aaKnown RBP7.83□□□□□ -1.16
CHKA-208ENST00000533910 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 SKIP12755 728 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 KCNH2Q12809 1159 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
CHKA-208ENST00000533910 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms