RNA–Protein interactions for RNA: ENST00000533809.2

LMO7-225, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-225ENST00000533809 DICER1Q9UPY3 1922 aaKnown RBP18.5■□□□□ 0.55
LMO7-225ENST00000533809 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
LMO7-225ENST00000533809 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
LMO7-225ENST00000533809 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
LMO7-225ENST00000533809 C9orf131Q5VYM1 1079 aa18.49■□□□□ 0.55
LMO7-225ENST00000533809 DNAJC5GQ8N7S2 189 aa18.49■□□□□ 0.55
LMO7-225ENST00000533809 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
LMO7-225ENST00000533809 COL11A2P13942 1736 aaPredicted RBP18.49■□□□□ 0.55
LMO7-225ENST00000533809 CHRNA5P30532 468 aa18.48■□□□□ 0.55
LMO7-225ENST00000533809 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
LMO7-225ENST00000533809 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
LMO7-225ENST00000533809 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
LMO7-225ENST00000533809 TM4SF1P30408 202 aa18.47■□□□□ 0.55
LMO7-225ENST00000533809 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
LMO7-225ENST00000533809 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
LMO7-225ENST00000533809 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
LMO7-225ENST00000533809 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
LMO7-225ENST00000533809 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
LMO7-225ENST00000533809 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
LMO7-225ENST00000533809 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.54
LMO7-225ENST00000533809 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
LMO7-225ENST00000533809 RBM46Q8TBY0 533 aaKnown RBP18.45■□□□□ 0.54
LMO7-225ENST00000533809 BCORQ6W2J9 1755 aa18.45■□□□□ 0.54
LMO7-225ENST00000533809 COL15A1P39059 1388 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 HMOX1P09601 288 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 ARFGEF2Q9Y6D5 1785 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 PCNTO95613 3336 aa18.44■□□□□ 0.54
LMO7-225ENST00000533809 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
LMO7-225ENST00000533809 CYP19A1P11511 503 aaPredicted RBP18.43■□□□□ 0.54
LMO7-225ENST00000533809 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
LMO7-225ENST00000533809 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
LMO7-225ENST00000533809 ZBTB1Q9Y2K1 713 aa18.42■□□□□ 0.54
LMO7-225ENST00000533809 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
LMO7-225ENST00000533809 HTRA3P83110 453 aa18.41■□□□□ 0.54
LMO7-225ENST00000533809 NFIXQ14938 502 aa18.41■□□□□ 0.54
LMO7-225ENST00000533809 NARFQ9UHQ1 456 aa18.41■□□□□ 0.54
LMO7-225ENST00000533809 ZPR1O75312 459 aa18.4■□□□□ 0.54
LMO7-225ENST00000533809 PRELPP51888 382 aa18.4■□□□□ 0.54
LMO7-225ENST00000533809 RASSF7Q02833 373 aa18.4■□□□□ 0.54
LMO7-225ENST00000533809 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
LMO7-225ENST00000533809 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
LMO7-225ENST00000533809 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
LMO7-225ENST00000533809 RRAGCQ9HB90 399 aa18.38■□□□□ 0.53
LMO7-225ENST00000533809 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
LMO7-225ENST00000533809 FSTL1Q12841 308 aa18.37■□□□□ 0.53
LMO7-225ENST00000533809 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
LMO7-225ENST00000533809 SLX4Q8IY92 1834 aa18.37■□□□□ 0.53
LMO7-225ENST00000533809 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
LMO7-225ENST00000533809 KLRG1Q96E93 195 aa18.36■□□□□ 0.53
LMO7-225ENST00000533809 ZC3H4Q9UPT8 1303 aaKnown RBP18.36■□□□□ 0.53
LMO7-225ENST00000533809 SERPINB2P05120 415 aa18.35■□□□□ 0.53
LMO7-225ENST00000533809 JMYQ8N9B5 988 aa18.34■□□□□ 0.53
LMO7-225ENST00000533809 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
LMO7-225ENST00000533809 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
LMO7-225ENST00000533809 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
LMO7-225ENST00000533809 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
LMO7-225ENST00000533809 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
LMO7-225ENST00000533809 NFKBIEO00221 500 aa18.32■□□□□ 0.52
LMO7-225ENST00000533809 LMNB1P20700 586 aa18.32■□□□□ 0.52
LMO7-225ENST00000533809 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
LMO7-225ENST00000533809 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
LMO7-225ENST00000533809 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
LMO7-225ENST00000533809 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
LMO7-225ENST00000533809 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
LMO7-225ENST00000533809 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
LMO7-225ENST00000533809 ZNF496Q96IT1 587 aaPredicted RBP18.3■□□□□ 0.52
LMO7-225ENST00000533809 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
LMO7-225ENST00000533809 TEFQ10587 303 aa18.29■□□□□ 0.52
LMO7-225ENST00000533809 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
LMO7-225ENST00000533809 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
LMO7-225ENST00000533809 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
LMO7-225ENST00000533809 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
LMO7-225ENST00000533809 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
LMO7-225ENST00000533809 DLG5Q8TDM6 1919 aa18.28■□□□□ 0.52
LMO7-225ENST00000533809 POTECB2RU33 542 aa18.27■□□□□ 0.52
LMO7-225ENST00000533809 H0YIN7 160 aa18.27■□□□□ 0.52
LMO7-225ENST00000533809 STARD3NLO95772 234 aa18.27■□□□□ 0.52
LMO7-225ENST00000533809 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
LMO7-225ENST00000533809 COL13A1Q5TAT6 717 aaPredicted RBP18.27■□□□□ 0.52
LMO7-225ENST00000533809 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
LMO7-225ENST00000533809 SCN4AP35499 1836 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 A0A087WZG4 1122 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
LMO7-225ENST00000533809 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
LMO7-225ENST00000533809 PRR5LQ6MZQ0 368 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 CCDC24Q8N4L8 307 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 CEMIPQ8WUJ3 1361 aa18.26■□□□□ 0.51
LMO7-225ENST00000533809 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
LMO7-225ENST00000533809 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
LMO7-225ENST00000533809 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
LMO7-225ENST00000533809 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
LMO7-225ENST00000533809 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.513e-7■■□□□ 12.8
LMO7-225ENST00000533809 BRIP1Q9BX63 1249 aa18.24■□□□□ 0.51
LMO7-225ENST00000533809 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
LMO7-225ENST00000533809 KCNQ3O43525 872 aa18.23■□□□□ 0.51
LMO7-225ENST00000533809 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms