RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 COL15A1P39059 1388 aa15.68■□□□□ 0.1
CMTM1-216ENST00000533078 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
CMTM1-216ENST00000533078 NARFQ9UHQ1 456 aa15.68■□□□□ 0.1
CMTM1-216ENST00000533078 VEGFAP15692 232 aaPredicted RBP15.67■□□□□ 0.1
CMTM1-216ENST00000533078 IL13P35225 146 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 HTRA3P83110 453 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 TTC5Q8N0Z6 440 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 JMYQ8N9B5 988 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 SBF1O95248 1867 aa15.67■□□□□ 0.1
CMTM1-216ENST00000533078 H0YIN7 160 aa15.66■□□□□ 0.1
CMTM1-216ENST00000533078 STARD3NLO95772 234 aa15.66■□□□□ 0.1
CMTM1-216ENST00000533078 CYP19A1P11511 503 aaPredicted RBP15.66■□□□□ 0.1
CMTM1-216ENST00000533078 RASSF7Q02833 373 aa15.66■□□□□ 0.1
CMTM1-216ENST00000533078 NFIXQ14938 502 aa15.66■□□□□ 0.1
CMTM1-216ENST00000533078 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
CMTM1-216ENST00000533078 VSIG10Q8N0Z9 540 aa15.66■□□□□ 0.1
CMTM1-216ENST00000533078 A0A087WZG4 1122 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
CMTM1-216ENST00000533078 SERPINB2P05120 415 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
CMTM1-216ENST00000533078 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.09
CMTM1-216ENST00000533078 LGR6Q9HBX8 967 aa15.64■□□□□ 0.09
CMTM1-216ENST00000533078 MRC1P22897 1456 aa15.64■□□□□ 0.09
CMTM1-216ENST00000533078 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
CMTM1-216ENST00000533078 NPHP1O15259 732 aa15.63■□□□□ 0.09
CMTM1-216ENST00000533078 HMOX1P09601 288 aa15.63■□□□□ 0.09
CMTM1-216ENST00000533078 CANXP27824 592 aaKnown RBP15.63■□□□□ 0.09
CMTM1-216ENST00000533078 ADAMTS7Q9UKP4 1686 aa15.63■□□□□ 0.09
CMTM1-216ENST00000533078 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
CMTM1-216ENST00000533078 TNS4Q8IZW8 715 aa15.62■□□□□ 0.09
CMTM1-216ENST00000533078 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
CMTM1-216ENST00000533078 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
CMTM1-216ENST00000533078 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
CMTM1-216ENST00000533078 PDE6BP35913 854 aa15.61■□□□□ 0.09
CMTM1-216ENST00000533078 TEFQ10587 303 aa15.61■□□□□ 0.09
CMTM1-216ENST00000533078 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
CMTM1-216ENST00000533078 TEX13AQ9BXU3 409 aaPredicted RBP15.61■□□□□ 0.09
CMTM1-216ENST00000533078 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
CMTM1-216ENST00000533078 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
CMTM1-216ENST00000533078 COL13A1Q5TAT6 717 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-216ENST00000533078 ZNF330Q9Y3S2 320 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-216ENST00000533078 TIAM2Q8IVF5 1701 aa15.6■□□□□ 0.09
CMTM1-216ENST00000533078 CAPN15O75808 1086 aa15.59■□□□□ 0.09
CMTM1-216ENST00000533078 ERFEQ4G0M1 354 aa15.58■□□□□ 0.08
CMTM1-216ENST00000533078 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-216ENST00000533078 BRIP1Q9BX63 1249 aa15.58■□□□□ 0.08
CMTM1-216ENST00000533078 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
CMTM1-216ENST00000533078 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
CMTM1-216ENST00000533078 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
CMTM1-216ENST00000533078 NFKBIEO00221 500 aa15.57■□□□□ 0.08
CMTM1-216ENST00000533078 EIF5P55010 431 aaKnown RBP15.57■□□□□ 0.08
CMTM1-216ENST00000533078 ST5P78524 1137 aa15.57■□□□□ 0.08
CMTM1-216ENST00000533078 SOGA3Q5TF21 947 aa15.57■□□□□ 0.08
CMTM1-216ENST00000533078 GAS2L2Q8NHY3 880 aa15.57■□□□□ 0.08
CMTM1-216ENST00000533078 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
CMTM1-216ENST00000533078 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
CMTM1-216ENST00000533078 SETDB2Q96T68 719 aa15.56■□□□□ 0.08
CMTM1-216ENST00000533078 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
CMTM1-216ENST00000533078 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 U2SURPO15042 1029 aaKnown RBP15.55■□□□□ 0.08
CMTM1-216ENST00000533078 C21orf2O43822 256 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
CMTM1-216ENST00000533078 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 CNKSR1Q969H4 720 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 TAOK3Q9H2K8 898 aa15.55■□□□□ 0.08
CMTM1-216ENST00000533078 HEG1Q9ULI3 1381 aa15.54■□□□□ 0.08
CMTM1-216ENST00000533078 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
CMTM1-216ENST00000533078 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
CMTM1-216ENST00000533078 PRELPP51888 382 aa15.53■□□□□ 0.08
CMTM1-216ENST00000533078 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
CMTM1-216ENST00000533078 ZNF496Q96IT1 587 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-216ENST00000533078 TBC1D2BQ9UPU7 963 aa15.53■□□□□ 0.08
CMTM1-216ENST00000533078 SCN7AQ01118 1682 aa15.53■□□□□ 0.08
CMTM1-216ENST00000533078 LTBP3Q9NS15 1303 aa15.52■□□□□ 0.08
CMTM1-216ENST00000533078 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.08
CMTM1-216ENST00000533078 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
CMTM1-216ENST00000533078 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
CMTM1-216ENST00000533078 DICER1Q9UPY3 1922 aaKnown RBP15.52■□□□□ 0.07
CMTM1-216ENST00000533078 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
CMTM1-216ENST00000533078 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
CMTM1-216ENST00000533078 CREBZFQ9NS37 354 aa15.51■□□□□ 0.07
CMTM1-216ENST00000533078 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
CMTM1-216ENST00000533078 KIF7Q2M1P5 1343 aa15.5■□□□□ 0.07
CMTM1-216ENST00000533078 BTBD11A6QL63 1104 aa15.5■□□□□ 0.07
CMTM1-216ENST00000533078 PRPF40BQ6NWY9 871 aaKnown RBP15.5■□□□□ 0.07
CMTM1-216ENST00000533078 CCDC24Q8N4L8 307 aa15.5■□□□□ 0.07
CMTM1-216ENST00000533078 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
CMTM1-216ENST00000533078 NBPF5PQ86XG9 351 aaPredicted RBP15.49■□□□□ 0.07
CMTM1-216ENST00000533078 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
CMTM1-216ENST00000533078 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
CMTM1-216ENST00000533078 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms