RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
LDLRAD3-205ENST00000532490 MCM10Q7L590 875 aa21.07■□□□□ 0.96
LDLRAD3-205ENST00000532490 NARFQ9UHQ1 456 aa21.07■□□□□ 0.96
LDLRAD3-205ENST00000532490 COL15A1P39059 1388 aa21.07■□□□□ 0.96
LDLRAD3-205ENST00000532490 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 STARD3NLO95772 234 aa21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 PLEKHF1Q96S99 279 aa21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 TEX13AQ9BXU3 409 aaPredicted RBP21.06■□□□□ 0.96
LDLRAD3-205ENST00000532490 ZPR1O75312 459 aa21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 EIF5P55010 431 aaKnown RBP21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 RALBP1Q15311 655 aa21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 WWC3Q9ULE0 1092 aa21.05■□□□□ 0.96
LDLRAD3-205ENST00000532490 POLRMTO00411 1230 aaKnown RBP21.04■□□□□ 0.96
LDLRAD3-205ENST00000532490 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
LDLRAD3-205ENST00000532490 DCTN1Q14203 1278 aa21.04■□□□□ 0.96
LDLRAD3-205ENST00000532490 RTF1Q92541 710 aaKnown RBP21.04■□□□□ 0.96
LDLRAD3-205ENST00000532490 A0A0G2JLW4 131 aa21.03■□□□□ 0.96
LDLRAD3-205ENST00000532490 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.96
LDLRAD3-205ENST00000532490 DPEP1P16444 411 aa21.02■□□□□ 0.96
LDLRAD3-205ENST00000532490 KCNA3P22001 575 aa21.02■□□□□ 0.96
LDLRAD3-205ENST00000532490 BRCA1P38398 1863 aaKnown RBP21.01■□□□□ 0.95
LDLRAD3-205ENST00000532490 NFIXQ14938 502 aa21.01■□□□□ 0.95
LDLRAD3-205ENST00000532490 USP16Q9Y5T5 823 aa21■□□□□ 0.95
LDLRAD3-205ENST00000532490 NRXN2Q9P2S2 1712 aa20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 A0A087WZG4 1122 aa20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 A1BGP04217 495 aa20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 IL6STP40189 918 aaPredicted RBP20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
LDLRAD3-205ENST00000532490 PRAMEF22A3QJZ6 481 aa20.98■□□□□ 0.95
LDLRAD3-205ENST00000532490 NFE2L2Q16236 605 aa20.97■□□□□ 0.95
LDLRAD3-205ENST00000532490 ADCY9O60503 1353 aa20.97■□□□□ 0.95
LDLRAD3-205ENST00000532490 NEFMP07197 916 aa20.96■□□□□ 0.95
LDLRAD3-205ENST00000532490 SNRPA1P09661 255 aaKnown RBP20.96■□□□□ 0.95
LDLRAD3-205ENST00000532490 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
LDLRAD3-205ENST00000532490 BCS1LQ9Y276 419 aa20.96■□□□□ 0.95
LDLRAD3-205ENST00000532490 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
LDLRAD3-205ENST00000532490 TBC1D2BQ9UPU7 963 aa20.95■□□□□ 0.94
LDLRAD3-205ENST00000532490 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
LDLRAD3-205ENST00000532490 SCN7AQ01118 1682 aa20.95■□□□□ 0.94
LDLRAD3-205ENST00000532490 SERPINB2P05120 415 aa20.94■□□□□ 0.94
LDLRAD3-205ENST00000532490 ARFGEF1Q9Y6D6 1849 aa20.93■□□□□ 0.94
LDLRAD3-205ENST00000532490 CHRNA5P30532 468 aa20.93■□□□□ 0.94
LDLRAD3-205ENST00000532490 TBC1D9BQ66K14 1250 aa20.93■□□□□ 0.94
LDLRAD3-205ENST00000532490 PIM2Q9P1W9 311 aa20.93■□□□□ 0.94
LDLRAD3-205ENST00000532490 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
LDLRAD3-205ENST00000532490 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
LDLRAD3-205ENST00000532490 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
LDLRAD3-205ENST00000532490 PIP4K2AP48426 406 aaPredicted RBP20.92■□□□□ 0.94
LDLRAD3-205ENST00000532490 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
LDLRAD3-205ENST00000532490 ZNF330Q9Y3S2 320 aaPredicted RBP20.92■□□□□ 0.94
LDLRAD3-205ENST00000532490 NBPF26B4DH59 902 aa20.91■□□□□ 0.94
LDLRAD3-205ENST00000532490 NBPF10Q6P3W6 841 aaKnown RBP20.91■□□□□ 0.94
LDLRAD3-205ENST00000532490 NBPF15Q8N660 670 aa20.91■□□□□ 0.94
LDLRAD3-205ENST00000532490 MAPK8IP3Q9UPT6 1336 aa20.91■□□□□ 0.94
LDLRAD3-205ENST00000532490 BICDL1Q6ZP65 573 aa20.9■□□□□ 0.94
LDLRAD3-205ENST00000532490 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
LDLRAD3-205ENST00000532490 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
LDLRAD3-205ENST00000532490 CARMIL3Q8ND23 1372 aa20.89■□□□□ 0.93
LDLRAD3-205ENST00000532490 DALRD3Q5D0E6 543 aaKnown RBP20.89■□□□□ 0.93
LDLRAD3-205ENST00000532490 DZIP3Q86Y13 1208 aaKnown RBP20.89■□□□□ 0.93
LDLRAD3-205ENST00000532490 EIF4A1P60842 406 aaKnown RBP20.88■□□□□ 0.93
LDLRAD3-205ENST00000532490 ARHGAP27Q6ZUM4 889 aa20.88■□□□□ 0.93
LDLRAD3-205ENST00000532490 PRKRIP1Q9H875 184 aaPredicted RBP20.88■□□□□ 0.93
LDLRAD3-205ENST00000532490 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 TMPOP42166 694 aaKnown RBP20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 RIPK4P57078 832 aa20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 C1QTNF8P60827 252 aa20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 NPM2Q86SE8 214 aaKnown RBP20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 DLEC1Q9Y238 1755 aa20.87■□□□□ 0.93
LDLRAD3-205ENST00000532490 ANKRD31Q8N7Z5 1873 aa20.86■□□□□ 0.93
LDLRAD3-205ENST00000532490 PRR5LQ6MZQ0 368 aa20.86■□□□□ 0.93
LDLRAD3-205ENST00000532490 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
LDLRAD3-205ENST00000532490 RGL2O15211 777 aa20.84■□□□□ 0.93
LDLRAD3-205ENST00000532490 SETDB2Q96T68 719 aa20.84■□□□□ 0.93
LDLRAD3-205ENST00000532490 C2CD5Q86YS7 1000 aa20.83■□□□□ 0.93
LDLRAD3-205ENST00000532490 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.93
LDLRAD3-205ENST00000532490 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.93
LDLRAD3-205ENST00000532490 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
LDLRAD3-205ENST00000532490 ADAMTS8Q9UP79 889 aa20.82■□□□□ 0.92
LDLRAD3-205ENST00000532490 H0YIN7 160 aa20.81■□□□□ 0.92
LDLRAD3-205ENST00000532490 CCDC24Q8N4L8 307 aa20.81■□□□□ 0.92
LDLRAD3-205ENST00000532490 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
LDLRAD3-205ENST00000532490 BABAM1Q9NWV8 329 aa20.81■□□□□ 0.92
LDLRAD3-205ENST00000532490 RRP7AQ9Y3A4 280 aaKnown RBP20.81■□□□□ 0.92
LDLRAD3-205ENST00000532490 SBF1O95248 1867 aa20.8■□□□□ 0.92
LDLRAD3-205ENST00000532490 TTLL6Q8N841 843 aa20.8■□□□□ 0.92
LDLRAD3-205ENST00000532490 ZNF526Q8TF50 670 aaPredicted RBP20.8■□□□□ 0.92
LDLRAD3-205ENST00000532490 TSPYL4Q9UJ04 414 aa20.8■□□□□ 0.92
LDLRAD3-205ENST00000532490 PDZRN3Q9UPQ7 1066 aa20.8■□□□□ 0.92
LDLRAD3-205ENST00000532490 PDE6BP35913 854 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 HLFQ16534 295 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms