RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 EVA1CP58658 441 aa18.88■□□□□ 0.61
SRPRA-206ENST00000532259 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
SRPRA-206ENST00000532259 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
SRPRA-206ENST00000532259 CABP4P57796 275 aa18.87■□□□□ 0.61
SRPRA-206ENST00000532259 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
SRPRA-206ENST00000532259 ZCRB1Q8TBF4 217 aaKnown RBP18.87■□□□□ 0.61
SRPRA-206ENST00000532259 ABCC6O95255 1503 aa18.87■□□□□ 0.61
SRPRA-206ENST00000532259 SPRYD3Q8NCJ5 442 aa18.86■□□□□ 0.61
SRPRA-206ENST00000532259 PXDNLA1KZ92 1463 aa18.86■□□□□ 0.61
SRPRA-206ENST00000532259 C5P01031 1676 aa18.86■□□□□ 0.61
SRPRA-206ENST00000532259 NHSL1Q5SYE7 1610 aa18.86■□□□□ 0.61
SRPRA-206ENST00000532259 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
SRPRA-206ENST00000532259 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
SRPRA-206ENST00000532259 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
SRPRA-206ENST00000532259 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
SRPRA-206ENST00000532259 DDX21Q9NR30 783 aaKnown RBP eCLIP18.84■□□□□ 0.613e-7■□□□□ 11
SRPRA-206ENST00000532259 BTG4Q9NY30 223 aa18.84■□□□□ 0.61
SRPRA-206ENST00000532259 TTC22Q5TAA0 569 aa18.84■□□□□ 0.61
SRPRA-206ENST00000532259 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
SRPRA-206ENST00000532259 IL2RBP14784 551 aa18.83■□□□□ 0.61
SRPRA-206ENST00000532259 CARD10Q9BWT7 1032 aa18.83■□□□□ 0.61
SRPRA-206ENST00000532259 N4BP2Q86UW6 1770 aaPredicted RBP18.83■□□□□ 0.6
SRPRA-206ENST00000532259 IL1RAPL2Q9NP60 686 aa18.82■□□□□ 0.6
SRPRA-206ENST00000532259 HYPKQ9NX55 129 aa18.82■□□□□ 0.6
SRPRA-206ENST00000532259 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
SRPRA-206ENST00000532259 COPS6Q7L5N1 327 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 BECN1Q14457 450 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 MRC1P22897 1456 aa18.81■□□□□ 0.6
SRPRA-206ENST00000532259 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
SRPRA-206ENST00000532259 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
SRPRA-206ENST00000532259 SDSP20132 328 aa18.8■□□□□ 0.6
SRPRA-206ENST00000532259 CHMP4AQ9BY43 222 aa18.8■□□□□ 0.6
SRPRA-206ENST00000532259 LRRCC1Q9C099 1032 aa18.8■□□□□ 0.6
SRPRA-206ENST00000532259 C9orf78Q9NZ63 289 aaPredicted RBP18.8■□□□□ 0.6
SRPRA-206ENST00000532259 SSH3Q8TE77 659 aa18.8■□□□□ 0.6
SRPRA-206ENST00000532259 FMNL2Q96PY5 1086 aa18.8■□□□□ 0.6
SRPRA-206ENST00000532259 IBTKQ9P2D0 1353 aaPredicted RBP18.8■□□□□ 0.6
SRPRA-206ENST00000532259 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
SRPRA-206ENST00000532259 CDC45O75419 566 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 SURF6O75683 361 aaKnown RBP18.79■□□□□ 0.6
SRPRA-206ENST00000532259 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 IGKV5-2P06315 115 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 PDE1AP54750 535 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 RTL5Q5HYW3 569 aaPredicted RBP18.79■□□□□ 0.6
SRPRA-206ENST00000532259 RIC3Q7Z5B4 369 aa18.79■□□□□ 0.6
SRPRA-206ENST00000532259 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
SRPRA-206ENST00000532259 POLA2Q14181 598 aa18.77■□□□□ 0.6
SRPRA-206ENST00000532259 PARP4Q9UKK3 1724 aaKnown RBP18.77■□□□□ 0.6
SRPRA-206ENST00000532259 NUTM1Q86Y26 1132 aa18.77■□□□□ 0.59
SRPRA-206ENST00000532259 SALL3Q9BXA9 1300 aa18.76■□□□□ 0.59
SRPRA-206ENST00000532259 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
SRPRA-206ENST00000532259 PA2G4Q9UQ80 394 aaKnown RBP18.76■□□□□ 0.59
SRPRA-206ENST00000532259 SHANK3Q9BYB0 1731 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 LINS1Q8NG48 757 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 MYD88Q99836 296 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 GLI3P10071 1580 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 KAT6BQ8WYB5 2073 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 NBPF26B4DH59 902 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 ALDH1L1O75891 902 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 DDX58O95786 925 aaKnown RBP18.75■□□□□ 0.59
SRPRA-206ENST00000532259 NBPF14Q5TI25 921 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 NBPF10Q6P3W6 841 aaKnown RBP18.75■□□□□ 0.59
SRPRA-206ENST00000532259 NBPF15Q8N660 670 aa18.75■□□□□ 0.59
SRPRA-206ENST00000532259 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
SRPRA-206ENST00000532259 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
SRPRA-206ENST00000532259 GRM8O00222 908 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 A1BGP04217 495 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 MX1P20591 662 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 ANKRD13DQ6ZTN6 518 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 KIF2CQ99661 725 aa18.74■□□□□ 0.59
SRPRA-206ENST00000532259 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
SRPRA-206ENST00000532259 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
SRPRA-206ENST00000532259 RBM25P49756 843 aaKnown RBP18.73■□□□□ 0.59
SRPRA-206ENST00000532259 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
SRPRA-206ENST00000532259 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
SRPRA-206ENST00000532259 MAP4K4O95819 1239 aaPredicted RBP18.73■□□□□ 0.59
SRPRA-206ENST00000532259 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
SRPRA-206ENST00000532259 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
SRPRA-206ENST00000532259 BICC1Q9H694 974 aaKnown RBP18.73■□□□□ 0.59
SRPRA-206ENST00000532259 NEURL1BA8MQ27 555 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 UNC5CLQ8IV45 518 aa18.72■□□□□ 0.59
SRPRA-206ENST00000532259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
SRPRA-206ENST00000532259 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
SRPRA-206ENST00000532259 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.58
SRPRA-206ENST00000532259 METTL22Q9BUU2 404 aaPredicted RBP18.71■□□□□ 0.58
SRPRA-206ENST00000532259 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.58
SRPRA-206ENST00000532259 GCKRQ14397 625 aa18.7■□□□□ 0.58
SRPRA-206ENST00000532259 TTLL7Q6ZT98 887 aa18.7■□□□□ 0.58
SRPRA-206ENST00000532259 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms