RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SCN11AQ9UI33 1791 aa27.22■■□□□ 1.95
HIPK3-205ENST00000531504 INTS5Q6P9B9 1019 aaKnown RBP27.22■■□□□ 1.95
HIPK3-205ENST00000531504 USPL1Q5W0Q7 1092 aa27.21■■□□□ 1.95
HIPK3-205ENST00000531504 NRXN2Q9P2S2 1712 aa27.21■■□□□ 1.95
HIPK3-205ENST00000531504 CCDC88AQ3V6T2 1871 aa27.21■■□□□ 1.95
HIPK3-205ENST00000531504 SOS1Q07889 1333 aaPredicted RBP27.18■■□□□ 1.94
HIPK3-205ENST00000531504 TTLL6Q8N841 843 aa27.18■■□□□ 1.94
HIPK3-205ENST00000531504 NFIXQ14938 502 aa27.16■■□□□ 1.94
HIPK3-205ENST00000531504 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
HIPK3-205ENST00000531504 DNAJC10Q8IXB1 793 aa27.16■■□□□ 1.94
HIPK3-205ENST00000531504 POLR3GLQ9BT43 218 aa27.16■■□□□ 1.94
HIPK3-205ENST00000531504 COL15A1P39059 1388 aa27.15■■□□□ 1.94
HIPK3-205ENST00000531504 NARFQ9UHQ1 456 aa27.15■■□□□ 1.94
HIPK3-205ENST00000531504 DPY19L2Q6NUT2 758 aa27.13■■□□□ 1.93
HIPK3-205ENST00000531504 H0YIN7 160 aa27.12■■□□□ 1.93
HIPK3-205ENST00000531504 SERPINB2P05120 415 aa27.12■■□□□ 1.93
HIPK3-205ENST00000531504 SULT6B1Q6IMI4 303 aa27.12■■□□□ 1.93
HIPK3-205ENST00000531504 C2CD5Q86YS7 1000 aa27.12■■□□□ 1.93
HIPK3-205ENST00000531504 CYP19A1P11511 503 aaPredicted RBP27.11■■□□□ 1.93
HIPK3-205ENST00000531504 SLC52A2Q9HAB3 445 aa27.11■■□□□ 1.93
HIPK3-205ENST00000531504 AKAP4Q5JQC9 854 aa27.1■■□□□ 1.93
HIPK3-205ENST00000531504 DICER1Q9UPY3 1922 aaKnown RBP27.1■■□□□ 1.93
HIPK3-205ENST00000531504 MRC1P22897 1456 aa27.09■■□□□ 1.93
HIPK3-205ENST00000531504 NFKBIEO00221 500 aa27.09■■□□□ 1.93
HIPK3-205ENST00000531504 VIRMAQ69YN4 1812 aaKnown RBP27.09■■□□□ 1.93
HIPK3-205ENST00000531504 ZBTB1Q9Y2K1 713 aa27.07■■□□□ 1.92
HIPK3-205ENST00000531504 CREBZFQ9NS37 354 aa27.06■■□□□ 1.92
HIPK3-205ENST00000531504 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
HIPK3-205ENST00000531504 MORC1Q86VD1 984 aa27.05■■□□□ 1.92
HIPK3-205ENST00000531504 BCL2L12Q9HB09 334 aa27.05■■□□□ 1.92
HIPK3-205ENST00000531504 CARMIL3Q8ND23 1372 aa27.05■■□□□ 1.92
HIPK3-205ENST00000531504 FER1L6Q2WGJ9 1857 aa27.04■■□□□ 1.92
HIPK3-205ENST00000531504 POTECB2RU33 542 aa27.04■■□□□ 1.92
HIPK3-205ENST00000531504 ERFEQ4G0M1 354 aa27.04■■□□□ 1.92
HIPK3-205ENST00000531504 CHADLQ6NUI6 762 aa27.03■■□□□ 1.92
HIPK3-205ENST00000531504 VSIG10Q8N0Z9 540 aa27.03■■□□□ 1.92
HIPK3-205ENST00000531504 PANK3Q9H999 370 aa27.03■■□□□ 1.92
HIPK3-205ENST00000531504 ANKRD31Q8N7Z5 1873 aa27.02■■□□□ 1.92
HIPK3-205ENST00000531504 SLC39A6Q13433 755 aa27.02■■□□□ 1.92
HIPK3-205ENST00000531504 PDE6BP35913 854 aa27.01■■□□□ 1.91
HIPK3-205ENST00000531504 ZNF622Q969S3 477 aaKnown RBP eCLIP27.01■■□□□ 1.91
HIPK3-205ENST00000531504 LGR6Q9HBX8 967 aa27.01■■□□□ 1.91
HIPK3-205ENST00000531504 UBR2Q8IWV8 1755 aa27.01■■□□□ 1.91
HIPK3-205ENST00000531504 A0A087WZG4 1122 aa27■■□□□ 1.91
HIPK3-205ENST00000531504 RNMTO43148 476 aaKnown RBP27■■□□□ 1.91
HIPK3-205ENST00000531504 IL13P35225 146 aa27■■□□□ 1.91
HIPK3-205ENST00000531504 BICDL1Q6ZP65 573 aa27■■□□□ 1.91
HIPK3-205ENST00000531504 MKRN1Q9UHC7 482 aaKnown RBP27■■□□□ 1.91
HIPK3-205ENST00000531504 TIMELESSQ9UNS1 1208 aa27■■□□□ 1.91
HIPK3-205ENST00000531504 COL11A2P13942 1736 aaPredicted RBP26.99■■□□□ 1.91
HIPK3-205ENST00000531504 SCN7AQ01118 1682 aa26.98■■□□□ 1.91
HIPK3-205ENST00000531504 LTBP3Q9NS15 1303 aa26.98■■□□□ 1.91
HIPK3-205ENST00000531504 C21orf2O43822 256 aa26.98■■□□□ 1.91
HIPK3-205ENST00000531504 STARD3NLO95772 234 aa26.98■■□□□ 1.91
HIPK3-205ENST00000531504 CANXP27824 592 aaKnown RBP26.98■■□□□ 1.91
HIPK3-205ENST00000531504 BRIP1Q9BX63 1249 aa26.98■■□□□ 1.91
HIPK3-205ENST00000531504 TAOK3Q9H2K8 898 aa26.97■■□□□ 1.91
HIPK3-205ENST00000531504 ZNF219Q9P2Y4 722 aaPredicted RBP26.96■■□□□ 1.91
HIPK3-205ENST00000531504 CNTNAP1P78357 1384 aa26.95■■□□□ 1.9
HIPK3-205ENST00000531504 EIF5P55010 431 aaKnown RBP26.94■■□□□ 1.9
HIPK3-205ENST00000531504 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
HIPK3-205ENST00000531504 AIDAQ96BJ3 306 aa26.94■■□□□ 1.9
HIPK3-205ENST00000531504 PRDM10Q9NQV6 1147 aa26.94■■□□□ 1.9
HIPK3-205ENST00000531504 CACNA1SQ13698 1873 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 IQCA1LA6NCM1 817 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 SOGA3Q5TF21 947 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 TBC1D9BQ66K14 1250 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 ARFGEF2Q9Y6D5 1785 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 SCN4AP35499 1836 aa26.93■■□□□ 1.9
HIPK3-205ENST00000531504 FOXN1O15353 648 aa26.92■■□□□ 1.9
HIPK3-205ENST00000531504 PRR5LQ6MZQ0 368 aa26.92■■□□□ 1.9
HIPK3-205ENST00000531504 CNKSR1Q969H4 720 aa26.92■■□□□ 1.9
HIPK3-205ENST00000531504 NPHP1O15259 732 aa26.91■■□□□ 1.9
HIPK3-205ENST00000531504 DDNO94850 711 aaPredicted RBP26.91■■□□□ 1.9
HIPK3-205ENST00000531504 KNSTRNQ9Y448 316 aa26.91■■□□□ 1.9
HIPK3-205ENST00000531504 POTEIP0CG38 1075 aa26.9■■□□□ 1.9
HIPK3-205ENST00000531504 POTEJP0CG39 1038 aa26.9■■□□□ 1.9
HIPK3-205ENST00000531504 CTCFP49711 727 aaPredicted RBP26.9■■□□□ 1.9
HIPK3-205ENST00000531504 LDHDQ86WU2 507 aa26.9■■□□□ 1.9
HIPK3-205ENST00000531504 HMOX1P09601 288 aa26.89■■□□□ 1.9
HIPK3-205ENST00000531504 SLX4Q8IY92 1834 aa26.88■■□□□ 1.89
HIPK3-205ENST00000531504 EIF4G2P78344 907 aaKnown RBP eCLIP26.88■■□□□ 1.89
HIPK3-205ENST00000531504 STYK1Q6J9G0 422 aa26.88■■□□□ 1.89
HIPK3-205ENST00000531504 NPM2Q86SE8 214 aaKnown RBP26.88■■□□□ 1.89
HIPK3-205ENST00000531504 CNBD1Q8NA66 436 aa26.88■■□□□ 1.89
HIPK3-205ENST00000531504 TEX13AQ9BXU3 409 aaPredicted RBP26.88■■□□□ 1.89
HIPK3-205ENST00000531504 ZNF330Q9Y3S2 320 aaPredicted RBP26.88■■□□□ 1.89
HIPK3-205ENST00000531504 PASKQ96RG2 1323 aa26.88■■□□□ 1.89
HIPK3-205ENST00000531504 ST5P78524 1137 aa26.87■■□□□ 1.89
HIPK3-205ENST00000531504 MTHFSDQ2M296 383 aaKnown RBP26.87■■□□□ 1.89
HIPK3-205ENST00000531504 PRPF40BQ6NWY9 871 aaKnown RBP26.87■■□□□ 1.89
HIPK3-205ENST00000531504 SETDB2Q96T68 719 aa26.87■■□□□ 1.89
HIPK3-205ENST00000531504 CCDC24Q8N4L8 307 aa26.86■■□□□ 1.89
HIPK3-205ENST00000531504 L3MBTL3Q96JM7 780 aaPredicted RBP26.86■■□□□ 1.89
HIPK3-205ENST00000531504 IL6STP40189 918 aaPredicted RBP26.85■■□□□ 1.89
HIPK3-205ENST00000531504 TBC1D2BQ9UPU7 963 aa26.85■■□□□ 1.89
HIPK3-205ENST00000531504 HEG1Q9ULI3 1381 aa26.84■■□□□ 1.89
HIPK3-205ENST00000531504 TMEM88BA6NKF7 163 aa26.84■■□□□ 1.89
HIPK3-205ENST00000531504 MASTLQ96GX5 879 aa26.84■■□□□ 1.89
HIPK3-205ENST00000531504 TAF1DQ9H5J8 278 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms