RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-206ENST00000531430 WDR90Q96KV7 1748 aa12.59□□□□□ -0.39
NEDD8-206ENST00000531430 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-206ENST00000531430 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 KNSTRNQ9Y448 316 aa12.58□□□□□ -0.4
NEDD8-206ENST00000531430 NPHP1O15259 732 aa12.57□□□□□ -0.4
NEDD8-206ENST00000531430 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
NEDD8-206ENST00000531430 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-206ENST00000531430 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEDD8-206ENST00000531430 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
NEDD8-206ENST00000531430 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
NEDD8-206ENST00000531430 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
NEDD8-206ENST00000531430 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
NEDD8-206ENST00000531430 IL13P35225 146 aa12.56□□□□□ -0.4
NEDD8-206ENST00000531430 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
NEDD8-206ENST00000531430 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
NEDD8-206ENST00000531430 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
NEDD8-206ENST00000531430 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
NEDD8-206ENST00000531430 C21orf2O43822 256 aa12.55□□□□□ -0.4
NEDD8-206ENST00000531430 PRELPP51888 382 aa12.55□□□□□ -0.4
NEDD8-206ENST00000531430 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
NEDD8-206ENST00000531430 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
NEDD8-206ENST00000531430 STARD3NLO95772 234 aa12.54□□□□□ -0.4
NEDD8-206ENST00000531430 ERFEQ4G0M1 354 aa12.54□□□□□ -0.4
NEDD8-206ENST00000531430 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
NEDD8-206ENST00000531430 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
NEDD8-206ENST00000531430 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
NEDD8-206ENST00000531430 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
NEDD8-206ENST00000531430 SBF1O95248 1867 aa12.53□□□□□ -0.4
NEDD8-206ENST00000531430 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
NEDD8-206ENST00000531430 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
NEDD8-206ENST00000531430 MKRN1Q9UHC7 482 aaKnown RBP12.53□□□□□ -0.4
NEDD8-206ENST00000531430 COL15A1P39059 1388 aa12.53□□□□□ -0.4
NEDD8-206ENST00000531430 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.4
NEDD8-206ENST00000531430 A0A087WZG4 1122 aa12.52□□□□□ -0.41
NEDD8-206ENST00000531430 NFKBIEO00221 500 aa12.52□□□□□ -0.41
NEDD8-206ENST00000531430 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
NEDD8-206ENST00000531430 PDE6BP35913 854 aa12.51□□□□□ -0.41
NEDD8-206ENST00000531430 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
NEDD8-206ENST00000531430 PCNTO95613 3336 aa12.5□□□□□ -0.41
NEDD8-206ENST00000531430 POTECB2RU33 542 aa12.5□□□□□ -0.41
NEDD8-206ENST00000531430 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
NEDD8-206ENST00000531430 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
NEDD8-206ENST00000531430 DDNO94850 711 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-206ENST00000531430 TEFQ10587 303 aa12.5□□□□□ -0.41
NEDD8-206ENST00000531430 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 TJP1Q07157 1748 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
NEDD8-206ENST00000531430 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
NEDD8-206ENST00000531430 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
NEDD8-206ENST00000531430 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
NEDD8-206ENST00000531430 A1BGP04217 495 aa12.48□□□□□ -0.41
NEDD8-206ENST00000531430 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
NEDD8-206ENST00000531430 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 CNKSR1Q969H4 720 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-206ENST00000531430 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-206ENST00000531430 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
NEDD8-206ENST00000531430 FAM177BA6PVY3 158 aa12.46□□□□□ -0.41
NEDD8-206ENST00000531430 ST5P78524 1137 aa12.46□□□□□ -0.41
NEDD8-206ENST00000531430 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-206ENST00000531430 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
NEDD8-206ENST00000531430 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
NEDD8-206ENST00000531430 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-206ENST00000531430 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
NEDD8-206ENST00000531430 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
NEDD8-206ENST00000531430 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
NEDD8-206ENST00000531430 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
NEDD8-206ENST00000531430 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-206ENST00000531430 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-206ENST00000531430 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
NEDD8-206ENST00000531430 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
NEDD8-206ENST00000531430 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
NEDD8-206ENST00000531430 FMNL2Q96PY5 1086 aa12.44□□□□□ -0.42
NEDD8-206ENST00000531430 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 FOXN1O15353 648 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 KCNQ3O43525 872 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-206ENST00000531430 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-206ENST00000531430 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
NEDD8-206ENST00000531430 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
NEDD8-206ENST00000531430 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
NEDD8-206ENST00000531430 SRGNP10124 158 aa12.42□□□□□ -0.42
NEDD8-206ENST00000531430 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms