RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
CHMP4A-204ENST00000530996 ADAMTS7Q9UKP4 1686 aa21.29■■□□□ 1
CHMP4A-204ENST00000530996 PER1O15534 1290 aaPredicted RBP21.29■■□□□ 1
CHMP4A-204ENST00000530996 CANXP27824 592 aaKnown RBP21.29■■□□□ 1
CHMP4A-204ENST00000530996 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
CHMP4A-204ENST00000530996 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
CHMP4A-204ENST00000530996 NARFQ9UHQ1 456 aa21.29■■□□□ 1
CHMP4A-204ENST00000530996 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
CHMP4A-204ENST00000530996 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
CHMP4A-204ENST00000530996 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
CHMP4A-204ENST00000530996 GAS2L2Q8NHY3 880 aa21.28■■□□□ 1
CHMP4A-204ENST00000530996 STARD3NLO95772 234 aa21.27■■□□□ 1
CHMP4A-204ENST00000530996 TM4SF1P30408 202 aa21.27■■□□□ 1
CHMP4A-204ENST00000530996 NFIXQ14938 502 aa21.27■■□□□ 1
CHMP4A-204ENST00000530996 NPC1L1Q9UHC9 1359 aa21.26■□□□□ 0.99
CHMP4A-204ENST00000530996 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
CHMP4A-204ENST00000530996 TOMM70O94826 608 aa21.26■□□□□ 0.99
CHMP4A-204ENST00000530996 BICDL1Q6ZP65 573 aa21.26■□□□□ 0.99
CHMP4A-204ENST00000530996 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
CHMP4A-204ENST00000530996 KDM2BQ8NHM5 1336 aa21.25■□□□□ 0.99
CHMP4A-204ENST00000530996 ARFGEF1Q9Y6D6 1849 aa21.25■□□□□ 0.99
CHMP4A-204ENST00000530996 SERPINB2P05120 415 aa21.24■□□□□ 0.99
CHMP4A-204ENST00000530996 A0A087WZG4 1122 aa21.23■□□□□ 0.99
CHMP4A-204ENST00000530996 APLP1P51693 650 aa21.23■□□□□ 0.99
CHMP4A-204ENST00000530996 RASSF7Q02833 373 aa21.23■□□□□ 0.99
CHMP4A-204ENST00000530996 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-204ENST00000530996 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
CHMP4A-204ENST00000530996 ZNF496Q96IT1 587 aaPredicted RBP21.22■□□□□ 0.99
CHMP4A-204ENST00000530996 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
CHMP4A-204ENST00000530996 CARMIL3Q8ND23 1372 aa21.22■□□□□ 0.99
CHMP4A-204ENST00000530996 HEG1Q9ULI3 1381 aa21.22■□□□□ 0.99
CHMP4A-204ENST00000530996 NPHP1O15259 732 aa21.21■□□□□ 0.99
CHMP4A-204ENST00000530996 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
CHMP4A-204ENST00000530996 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
CHMP4A-204ENST00000530996 C2CD5Q86YS7 1000 aa21.21■□□□□ 0.99
CHMP4A-204ENST00000530996 BCL2L12Q9HB09 334 aa21.21■□□□□ 0.99
CHMP4A-204ENST00000530996 TTLL6Q8N841 843 aa21.19■□□□□ 0.98
CHMP4A-204ENST00000530996 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
CHMP4A-204ENST00000530996 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
CHMP4A-204ENST00000530996 TEX13AQ9BXU3 409 aaPredicted RBP21.19■□□□□ 0.98
CHMP4A-204ENST00000530996 SCN7AQ01118 1682 aa21.18■□□□□ 0.98
CHMP4A-204ENST00000530996 H0YIN7 160 aa21.18■□□□□ 0.98
CHMP4A-204ENST00000530996 EIF5P55010 431 aaKnown RBP21.18■□□□□ 0.98
CHMP4A-204ENST00000530996 RBM46Q8TBY0 533 aaKnown RBP21.18■□□□□ 0.98
CHMP4A-204ENST00000530996 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
CHMP4A-204ENST00000530996 TBC1D9BQ66K14 1250 aa21.17■□□□□ 0.98
CHMP4A-204ENST00000530996 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
CHMP4A-204ENST00000530996 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
CHMP4A-204ENST00000530996 AFDNP55196 1824 aaKnown RBP21.16■□□□□ 0.98
CHMP4A-204ENST00000530996 BTBD11A6QL63 1104 aa21.16■□□□□ 0.98
CHMP4A-204ENST00000530996 CEMIPQ8WUJ3 1361 aa21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 LMNB1P20700 586 aa21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 ZNF622Q969S3 477 aaKnown RBP eCLIP21.15■□□□□ 0.982e-7■■■□□ 18.4
CHMP4A-204ENST00000530996 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 RRAGCQ9HB90 399 aa21.15■□□□□ 0.98
CHMP4A-204ENST00000530996 IL6STP40189 918 aaPredicted RBP21.14■□□□□ 0.97
CHMP4A-204ENST00000530996 CCDC24Q8N4L8 307 aa21.14■□□□□ 0.97
CHMP4A-204ENST00000530996 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
CHMP4A-204ENST00000530996 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
CHMP4A-204ENST00000530996 TNRC6CQ9HCJ0 1690 aaKnown RBP21.14■□□□□ 0.97
CHMP4A-204ENST00000530996 DLEC1Q9Y238 1755 aa21.13■□□□□ 0.97
CHMP4A-204ENST00000530996 ZC3H4Q9UPT8 1303 aaKnown RBP21.13■□□□□ 0.97
CHMP4A-204ENST00000530996 A1BGP04217 495 aa21.13■□□□□ 0.97
CHMP4A-204ENST00000530996 CNBD1Q8NA66 436 aa21.13■□□□□ 0.97
CHMP4A-204ENST00000530996 PDE6BP35913 854 aa21.12■□□□□ 0.97
CHMP4A-204ENST00000530996 FSTL1Q12841 308 aa21.12■□□□□ 0.97
CHMP4A-204ENST00000530996 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
CHMP4A-204ENST00000530996 KCNQ3O43525 872 aa21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 PIP4K2AP48426 406 aaPredicted RBP21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 ST5P78524 1137 aa21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 PRR5LQ6MZQ0 368 aa21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 SETDB2Q96T68 719 aa21.11■□□□□ 0.97
CHMP4A-204ENST00000530996 MCM10Q7L590 875 aa21.1■□□□□ 0.97
CHMP4A-204ENST00000530996 BRIP1Q9BX63 1249 aa21.1■□□□□ 0.97
CHMP4A-204ENST00000530996 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 NFKBIEO00221 500 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 CAMTA2O94983 1202 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 HTRA3P83110 453 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 SMC1BQ8NDV3 1235 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 WDR90Q96KV7 1748 aa21.09■□□□□ 0.97
CHMP4A-204ENST00000530996 C21orf2O43822 256 aa21.08■□□□□ 0.97
CHMP4A-204ENST00000530996 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
CHMP4A-204ENST00000530996 PRELPP51888 382 aa21.07■□□□□ 0.96
CHMP4A-204ENST00000530996 PRAMEF22A3QJZ6 481 aa21.06■□□□□ 0.96
CHMP4A-204ENST00000530996 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
CHMP4A-204ENST00000530996 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
CHMP4A-204ENST00000530996 NEFMP07197 916 aa21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 SNRPA1P09661 255 aaKnown RBP21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 NBPF5PQ86XG9 351 aaPredicted RBP21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 BCORQ6W2J9 1755 aa21.05■□□□□ 0.96
CHMP4A-204ENST00000530996 ANKRD31Q8N7Z5 1873 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms