RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 USPL1Q5W0Q7 1092 aa27.98■■■□□ 2.07
SMPD1-204ENST00000530395 IL17REQ8NFR9 667 aa27.98■■■□□ 2.07
SMPD1-204ENST00000530395 RSPH6AQ9H0K4 717 aa27.98■■■□□ 2.07
SMPD1-204ENST00000530395 GPBP1L1Q9HC44 474 aaPredicted RBP27.98■■■□□ 2.07
SMPD1-204ENST00000530395 ARFGEF1Q9Y6D6 1849 aa27.97■■■□□ 2.07
SMPD1-204ENST00000530395 STARD3NLO95772 234 aa27.97■■■□□ 2.07
SMPD1-204ENST00000530395 NARFQ9UHQ1 456 aa27.97■■■□□ 2.07
SMPD1-204ENST00000530395 FCHSD2O94868 740 aa27.95■■■□□ 2.06
SMPD1-204ENST00000530395 ZNF790Q6PG37 636 aa27.95■■■□□ 2.06
SMPD1-204ENST00000530395 POLRMTO00411 1230 aaKnown RBP27.94■■■□□ 2.06
SMPD1-204ENST00000530395 U2AF1L5P0DN76 240 aaPredicted RBP27.94■■■□□ 2.06
SMPD1-204ENST00000530395 TM4SF1P30408 202 aa27.94■■■□□ 2.06
SMPD1-204ENST00000530395 U2AF1Q01081 240 aaKnown RBP eCLIP27.94■■■□□ 2.06
SMPD1-204ENST00000530395 PHACTR3Q96KR7 559 aa27.94■■■□□ 2.06
SMPD1-204ENST00000530395 CEMIPQ8WUJ3 1361 aa27.94■■■□□ 2.06
SMPD1-204ENST00000530395 HEG1Q9ULI3 1381 aa27.94■■■□□ 2.06
SMPD1-204ENST00000530395 AFDNP55196 1824 aaKnown RBP27.94■■■□□ 2.06
SMPD1-204ENST00000530395 CANXP27824 592 aaKnown RBP27.93■■■□□ 2.06
SMPD1-204ENST00000530395 ZNF526Q8TF50 670 aaPredicted RBP27.93■■■□□ 2.06
SMPD1-204ENST00000530395 ZNF496Q96IT1 587 aaPredicted RBP27.93■■■□□ 2.06
SMPD1-204ENST00000530395 TEX13AQ9BXU3 409 aaPredicted RBP27.93■■■□□ 2.06
SMPD1-204ENST00000530395 PIM2Q9P1W9 311 aa27.92■■■□□ 2.06
SMPD1-204ENST00000530395 ARHGAP27Q6ZUM4 889 aa27.91■■■□□ 2.06
SMPD1-204ENST00000530395 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
SMPD1-204ENST00000530395 NRXN2Q9P2S2 1712 aa27.9■■■□□ 2.06
SMPD1-204ENST00000530395 A0A087WZG4 1122 aa27.9■■■□□ 2.06
SMPD1-204ENST00000530395 KCNA3P22001 575 aa27.9■■■□□ 2.06
SMPD1-204ENST00000530395 NFIXQ14938 502 aa27.89■■■□□ 2.06
SMPD1-204ENST00000530395 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
SMPD1-204ENST00000530395 SCN7AQ01118 1682 aa27.88■■■□□ 2.05
SMPD1-204ENST00000530395 BTBD11A6QL63 1104 aa27.88■■■□□ 2.05
SMPD1-204ENST00000530395 DALRD3Q5D0E6 543 aaKnown RBP27.88■■■□□ 2.05
SMPD1-204ENST00000530395 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
SMPD1-204ENST00000530395 BCL2L12Q9HB09 334 aa27.86■■■□□ 2.05
SMPD1-204ENST00000530395 CHRNA5P30532 468 aa27.85■■■□□ 2.05
SMPD1-204ENST00000530395 NPM2Q86SE8 214 aaKnown RBP27.85■■■□□ 2.05
SMPD1-204ENST00000530395 DLEC1Q9Y238 1755 aa27.84■■■□□ 2.05
SMPD1-204ENST00000530395 ZNF330Q9Y3S2 320 aaPredicted RBP27.84■■■□□ 2.05
SMPD1-204ENST00000530395 SERPINB2P05120 415 aa27.83■■■□□ 2.05
SMPD1-204ENST00000530395 IL6STP40189 918 aaPredicted RBP27.83■■■□□ 2.05
SMPD1-204ENST00000530395 HTATSF1O43719 755 aaKnown RBP27.81■■■□□ 2.04
SMPD1-204ENST00000530395 NEFMP07197 916 aa27.81■■■□□ 2.04
SMPD1-204ENST00000530395 MCM10Q7L590 875 aa27.81■■■□□ 2.04
SMPD1-204ENST00000530395 CEP350Q5VT06 3117 aa27.81■■■□□ 2.04
SMPD1-204ENST00000530395 KCNQ3O43525 872 aa27.8■■■□□ 2.04
SMPD1-204ENST00000530395 BICDL1Q6ZP65 573 aa27.79■■■□□ 2.04
SMPD1-204ENST00000530395 BCORQ6W2J9 1755 aa27.78■■■□□ 2.04
SMPD1-204ENST00000530395 A1BGP04217 495 aa27.78■■■□□ 2.04
SMPD1-204ENST00000530395 TBC1D2BQ9UPU7 963 aa27.78■■■□□ 2.04
SMPD1-204ENST00000530395 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
SMPD1-204ENST00000530395 C9orf131Q5VYM1 1079 aa27.76■■■□□ 2.03
SMPD1-204ENST00000530395 TBC1D9BQ66K14 1250 aa27.76■■■□□ 2.03
SMPD1-204ENST00000530395 CARMIL3Q8ND23 1372 aa27.75■■■□□ 2.03
SMPD1-204ENST00000530395 SBF1O95248 1867 aa27.75■■■□□ 2.03
SMPD1-204ENST00000530395 SNRPA1P09661 255 aaKnown RBP27.75■■■□□ 2.03
SMPD1-204ENST00000530395 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
SMPD1-204ENST00000530395 H0YIN7 160 aa27.74■■■□□ 2.03
SMPD1-204ENST00000530395 C2CD5Q86YS7 1000 aa27.74■■■□□ 2.03
SMPD1-204ENST00000530395 ANKRD31Q8N7Z5 1873 aa27.74■■■□□ 2.03
SMPD1-204ENST00000530395 KIF3CO14782 793 aa27.73■■■□□ 2.03
SMPD1-204ENST00000530395 DZIP3Q86Y13 1208 aaKnown RBP27.72■■■□□ 2.03
SMPD1-204ENST00000530395 USP16Q9Y5T5 823 aa27.72■■■□□ 2.03
SMPD1-204ENST00000530395 LAMB4A4D0S4 1761 aa27.72■■■□□ 2.03
SMPD1-204ENST00000530395 CAMTA2O94983 1202 aa27.71■■■□□ 2.03
SMPD1-204ENST00000530395 TAF7Q15545 349 aaPredicted RBP27.71■■■□□ 2.03
SMPD1-204ENST00000530395 TTLL6Q8N841 843 aa27.71■■■□□ 2.03
SMPD1-204ENST00000530395 SETDB2Q96T68 719 aa27.71■■■□□ 2.03
SMPD1-204ENST00000530395 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
SMPD1-204ENST00000530395 RNF181Q9P0P0 153 aa27.71■■■□□ 2.03
SMPD1-204ENST00000530395 PDZRN3Q9UPQ7 1066 aa27.71■■■□□ 2.03
SMPD1-204ENST00000530395 KDM3BQ7LBC6 1761 aa27.69■■■□□ 2.02
SMPD1-204ENST00000530395 PRAMEF22A3QJZ6 481 aa27.69■■■□□ 2.02
SMPD1-204ENST00000530395 NPHP1O15259 732 aa27.69■■■□□ 2.02
SMPD1-204ENST00000530395 PDE6BP35913 854 aa27.69■■■□□ 2.02
SMPD1-204ENST00000530395 BRIP1Q9BX63 1249 aa27.69■■■□□ 2.02
SMPD1-204ENST00000530395 COL11A2P13942 1736 aaPredicted RBP27.68■■■□□ 2.02
SMPD1-204ENST00000530395 HSPA6P17066 643 aa27.68■■■□□ 2.02
SMPD1-204ENST00000530395 PRR5LQ6MZQ0 368 aa27.68■■■□□ 2.02
SMPD1-204ENST00000530395 MAPK8IP3Q9UPT6 1336 aa27.67■■■□□ 2.02
SMPD1-204ENST00000530395 PIP4K2AP48426 406 aaPredicted RBP27.67■■■□□ 2.02
SMPD1-204ENST00000530395 CNBD1Q8NA66 436 aa27.67■■■□□ 2.02
SMPD1-204ENST00000530395 PNISRQ8TF01 805 aaKnown RBP27.67■■■□□ 2.02
SMPD1-204ENST00000530395 ZNF652Q9Y2D9 606 aa27.67■■■□□ 2.02
SMPD1-204ENST00000530395 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
SMPD1-204ENST00000530395 PLEKHF1Q96S99 279 aa27.66■■■□□ 2.02
SMPD1-204ENST00000530395 TOMM70O94826 608 aa27.65■■■□□ 2.02
SMPD1-204ENST00000530395 ST5P78524 1137 aa27.65■■■□□ 2.02
SMPD1-204ENST00000530395 NFE2L2Q16236 605 aa27.65■■■□□ 2.02
SMPD1-204ENST00000530395 NMRK2Q9NPI5 230 aa27.65■■■□□ 2.02
SMPD1-204ENST00000530395 TNRC6CQ9HCJ0 1690 aaKnown RBP27.65■■■□□ 2.02
SMPD1-204ENST00000530395 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.02
SMPD1-204ENST00000530395 RASSF7Q02833 373 aa27.64■■■□□ 2.02
SMPD1-204ENST00000530395 RALBP1Q15311 655 aa27.64■■■□□ 2.02
SMPD1-204ENST00000530395 CLEC4GQ6UXB4 293 aa27.64■■■□□ 2.02
SMPD1-204ENST00000530395 ZNF622Q969S3 477 aaKnown RBP eCLIP27.64■■■□□ 2.02
SMPD1-204ENST00000530395 ZC3H4Q9UPT8 1303 aaKnown RBP27.64■■■□□ 2.01
SMPD1-204ENST00000530395 CCDC24Q8N4L8 307 aa27.63■■■□□ 2.01
SMPD1-204ENST00000530395 MIS18AQ9NYP9 233 aa27.63■■■□□ 2.01
SMPD1-204ENST00000530395 CACNA1SQ13698 1873 aa27.62■■■□□ 2.01
SMPD1-204ENST00000530395 TIAM2Q8IVF5 1701 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms