RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
KDM2A-212ENST00000530342 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
KDM2A-212ENST00000530342 NOL7Q9UMY1 257 aaKnown RBP12.37□□□□□ -0.43
KDM2A-212ENST00000530342 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
KDM2A-212ENST00000530342 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
KDM2A-212ENST00000530342 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
KDM2A-212ENST00000530342 MAP3K19Q56UN5 1328 aa12.36□□□□□ -0.43
KDM2A-212ENST00000530342 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
KDM2A-212ENST00000530342 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
KDM2A-212ENST00000530342 IL25Q9H293 177 aa12.36□□□□□ -0.43
KDM2A-212ENST00000530342 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
KDM2A-212ENST00000530342 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
KDM2A-212ENST00000530342 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
KDM2A-212ENST00000530342 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
KDM2A-212ENST00000530342 PTPRCP08575 1304 aa12.35□□□□□ -0.43
KDM2A-212ENST00000530342 MEIS3Q99687 375 aa12.35□□□□□ -0.43
KDM2A-212ENST00000530342 NAP1L2Q9ULW6 460 aaPredicted RBP12.35□□□□□ -0.43
KDM2A-212ENST00000530342 SMARCA5O60264 1052 aaPredicted RBP12.34□□□□□ -0.43
KDM2A-212ENST00000530342 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
KDM2A-212ENST00000530342 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
KDM2A-212ENST00000530342 BTG4Q9NY30 223 aa12.34□□□□□ -0.43
KDM2A-212ENST00000530342 BRD1O95696 1058 aa12.33□□□□□ -0.44
KDM2A-212ENST00000530342 TPM2P07951 284 aa12.33□□□□□ -0.44
KDM2A-212ENST00000530342 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
KDM2A-212ENST00000530342 RBM27Q9P2N5 1060 aaKnown RBP12.33□□□□□ -0.44
KDM2A-212ENST00000530342 C5P01031 1676 aa12.33□□□□□ -0.44
KDM2A-212ENST00000530342 PALD1Q9ULE6 856 aa12.33□□□□□ -0.44
KDM2A-212ENST00000530342 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
KDM2A-212ENST00000530342 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
KDM2A-212ENST00000530342 CWC22Q9HCG8 908 aaKnown RBP12.32□□□□□ -0.44
KDM2A-212ENST00000530342 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
KDM2A-212ENST00000530342 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 NUCB2P80303 420 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
KDM2A-212ENST00000530342 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-212ENST00000530342 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
KDM2A-212ENST00000530342 PDE1AP54750 535 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
KDM2A-212ENST00000530342 G2E3Q7L622 706 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 NFAT5O94916 1531 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
KDM2A-212ENST00000530342 HOXC9P31274 260 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
KDM2A-212ENST00000530342 ROBO1Q9Y6N7 1651 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 MRC1P22897 1456 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 FBXO41Q8TF61 875 aa12.3□□□□□ -0.44
KDM2A-212ENST00000530342 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
KDM2A-212ENST00000530342 GLI3P10071 1580 aa12.29□□□□□ -0.44
KDM2A-212ENST00000530342 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
KDM2A-212ENST00000530342 TMEM87AQ8NBN3 555 aa12.29□□□□□ -0.44
KDM2A-212ENST00000530342 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-212ENST00000530342 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-212ENST00000530342 ARHGEF25Q86VW2 580 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 SBNO1A3KN83 1393 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 MCM10Q7L590 875 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 ZKSCAN5Q9Y2L8 839 aa12.28□□□□□ -0.44
KDM2A-212ENST00000530342 JCADQ9P266 1359 aa12.27□□□□□ -0.44
KDM2A-212ENST00000530342 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
KDM2A-212ENST00000530342 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
KDM2A-212ENST00000530342 FUCA2Q9BTY2 467 aa12.27□□□□□ -0.45
KDM2A-212ENST00000530342 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
KDM2A-212ENST00000530342 ERC2O15083 957 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
KDM2A-212ENST00000530342 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 IP6K1Q92551 441 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 PNMA6EA0A0J9YXQ4 647 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
KDM2A-212ENST00000530342 TTC14Q96N46 770 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 USP21Q9UK80 565 aa12.26□□□□□ -0.45
KDM2A-212ENST00000530342 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
KDM2A-212ENST00000530342 BRD2P25440 801 aaKnown RBP12.25□□□□□ -0.45
KDM2A-212ENST00000530342 CHMLP26374 656 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
KDM2A-212ENST00000530342 EYA1Q99502 592 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
KDM2A-212ENST00000530342 PXDNQ92626 1479 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 FLT4P35916 1363 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 ANAPC15P60006 121 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 TSHZ3Q63HK5 1081 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 AOX1Q06278 1338 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 SYCE3A1L190 88 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 PI4K2BQ8TCG2 481 aa12.24□□□□□ -0.45
KDM2A-212ENST00000530342 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
KDM2A-212ENST00000530342 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-212ENST00000530342 MCM5P33992 734 aa12.23□□□□□ -0.45
KDM2A-212ENST00000530342 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
KDM2A-212ENST00000530342 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
KDM2A-212ENST00000530342 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
KDM2A-212ENST00000530342 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms