RNA–Protein interactions for RNA: ENST00000529969.1

NPIPB4-206, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-206ENST00000529969 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
NPIPB4-206ENST00000529969 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
NPIPB4-206ENST00000529969 DDX21Q9NR30 783 aaKnown RBP eCLIP8.66□□□□□ -1.02
NPIPB4-206ENST00000529969 RGPD5Q99666 1765 aa8.66□□□□□ -1.02
NPIPB4-206ENST00000529969 MRC1P22897 1456 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 AOX1Q06278 1338 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 REC8O95072 547 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 GSPT1P15170 499 aaKnown RBP8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 BEND3Q5T5X7 828 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 ZNF790Q6PG37 636 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 KSR2Q6VAB6 950 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 C16orf71Q8IYS4 520 aaPredicted RBP8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 SSH3Q8TE77 659 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 SNX21Q969T3 373 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 BCL11AQ9H165 835 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 EXOC6BQ9Y2D4 811 aa8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
NPIPB4-206ENST00000529969 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.03
NPIPB4-206ENST00000529969 ADCY9O60503 1353 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PNMA6EA0A0J9YXQ4 647 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 SDSP20132 328 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 MX1P20591 662 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PDE1AP54750 535 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 CABP4P57796 275 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 PIP4K2BP78356 416 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 FMNL2Q96PY5 1086 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 C9orf78Q9NZ63 289 aaPredicted RBP8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 MAP3K2Q9Y2U5 619 aa8.64□□□□□ -1.03
NPIPB4-206ENST00000529969 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 SRGAP3O43295 1099 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 POLA2Q14181 598 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 LINS1Q8NG48 757 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 OTUD7AQ8TE49 926 aaPredicted RBP8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 KIF1BPQ96EK5 621 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
NPIPB4-206ENST00000529969 ERC2O15083 957 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 ANXA1P04083 346 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 EVA1CP58658 441 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 MTX1Q13505 466 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 RABEP1Q15276 862 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 PPP1R42Q7Z4L9 355 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 ZCRB1Q8TBF4 217 aaKnown RBP8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 CARD10Q9BWT7 1032 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 SLKQ9H2G2 1235 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 CHMP5Q9NZZ3 219 aa8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 COL5A2P05997 1499 aaPredicted RBP8.62□□□□□ -1.03
NPIPB4-206ENST00000529969 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 CYP27B1O15528 508 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 IL2RBP14784 551 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 MCCP23508 829 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 DEKP35659 375 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 SLC39A6Q13433 755 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 PROSER3Q2NL68 480 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 COL16A1Q07092 1604 aaPredicted RBP8.61□□□□□ -1.03
NPIPB4-206ENST00000529969 SALL3Q9BXA9 1300 aa8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 GRM8O00222 908 aa8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 AIMP1Q12904 312 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 RHPN1Q8TCX5 695 aa8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-206ENST00000529969 UTYO14607 1347 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 K7ELQ4 463 aaPredicted RBP8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 MYL6BP14649 208 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 PDIA6Q15084 440 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 CLASRPQ8N2M8 674 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 XAGE3Q8WTP9 111 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 USP26Q9BXU7 913 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 ABCA3Q99758 1704 aa8.59□□□□□ -1.03
NPIPB4-206ENST00000529969 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
NPIPB4-206ENST00000529969 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
NPIPB4-206ENST00000529969 ST18O60284 1047 aa8.58□□□□□ -1.04
NPIPB4-206ENST00000529969 NKX1-1Q15270 411 aaPredicted RBP8.58□□□□□ -1.04
NPIPB4-206ENST00000529969 CWF19L2Q2TBE0 894 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms