RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NARFQ9UHQ1 456 aa14.29□□□□□ -0.12
COPB1-207ENST00000529866 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
COPB1-207ENST00000529866 H0YIN7 160 aa14.28□□□□□ -0.12
COPB1-207ENST00000529866 COL15A1P39059 1388 aa14.28□□□□□ -0.12
COPB1-207ENST00000529866 C2CD5Q86YS7 1000 aa14.28□□□□□ -0.12
COPB1-207ENST00000529866 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
COPB1-207ENST00000529866 SERPINB2P05120 415 aa14.27□□□□□ -0.13
COPB1-207ENST00000529866 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
COPB1-207ENST00000529866 NFKBIEO00221 500 aa14.26□□□□□ -0.13
COPB1-207ENST00000529866 CYP19A1P11511 503 aaPredicted RBP14.26□□□□□ -0.13
COPB1-207ENST00000529866 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
COPB1-207ENST00000529866 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
COPB1-207ENST00000529866 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
COPB1-207ENST00000529866 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
COPB1-207ENST00000529866 ERFEQ4G0M1 354 aa14.25□□□□□ -0.13
COPB1-207ENST00000529866 ZBTB1Q9Y2K1 713 aa14.25□□□□□ -0.13
COPB1-207ENST00000529866 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
COPB1-207ENST00000529866 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
COPB1-207ENST00000529866 TJP1Q07157 1748 aa14.24□□□□□ -0.13
COPB1-207ENST00000529866 POTECB2RU33 542 aa14.23□□□□□ -0.13
COPB1-207ENST00000529866 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
COPB1-207ENST00000529866 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
COPB1-207ENST00000529866 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.136e-21■□□□□ 8.9
COPB1-207ENST00000529866 AIDAQ96BJ3 306 aa14.23□□□□□ -0.13
COPB1-207ENST00000529866 SBF1O95248 1867 aa14.23□□□□□ -0.13
COPB1-207ENST00000529866 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 A0A087WZG4 1122 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 PDE6BP35913 854 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
COPB1-207ENST00000529866 ADAMTS7Q9UKP4 1686 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 MRC1P22897 1456 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 IQCA1LA6NCM1 817 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 STARD3NLO95772 234 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 SLC39A6Q13433 755 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
COPB1-207ENST00000529866 CNTNAP1P78357 1384 aa14.21□□□□□ -0.14
COPB1-207ENST00000529866 LTBP3Q9NS15 1303 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 NPHP1O15259 732 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
COPB1-207ENST00000529866 C21orf2O43822 256 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 CANXP27824 592 aaKnown RBP14.2□□□□□ -0.14
COPB1-207ENST00000529866 IL13P35225 146 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 PANK3Q9H999 370 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 TIAM2Q8IVF5 1701 aa14.2□□□□□ -0.14
COPB1-207ENST00000529866 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
COPB1-207ENST00000529866 FOXN1O15353 648 aa14.19□□□□□ -0.14
COPB1-207ENST00000529866 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
COPB1-207ENST00000529866 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
COPB1-207ENST00000529866 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
COPB1-207ENST00000529866 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
COPB1-207ENST00000529866 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
COPB1-207ENST00000529866 EIF5P55010 431 aaKnown RBP14.18□□□□□ -0.14
COPB1-207ENST00000529866 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
COPB1-207ENST00000529866 LDHDQ86WU2 507 aa14.18□□□□□ -0.14
COPB1-207ENST00000529866 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
COPB1-207ENST00000529866 DDNO94850 711 aaPredicted RBP14.17□□□□□ -0.14
COPB1-207ENST00000529866 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
COPB1-207ENST00000529866 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
COPB1-207ENST00000529866 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
COPB1-207ENST00000529866 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
COPB1-207ENST00000529866 DLEC1Q9Y238 1755 aa14.17□□□□□ -0.14
COPB1-207ENST00000529866 TMEM88BA6NKF7 163 aa14.16□□□□□ -0.14
COPB1-207ENST00000529866 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
COPB1-207ENST00000529866 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
COPB1-207ENST00000529866 ST5P78524 1137 aa14.16□□□□□ -0.14
COPB1-207ENST00000529866 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
COPB1-207ENST00000529866 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
COPB1-207ENST00000529866 KNSTRNQ9Y448 316 aa14.16□□□□□ -0.14
COPB1-207ENST00000529866 PASKQ96RG2 1323 aa14.15□□□□□ -0.14
COPB1-207ENST00000529866 STYK1Q6J9G0 422 aa14.15□□□□□ -0.14
COPB1-207ENST00000529866 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
COPB1-207ENST00000529866 SETDB2Q96T68 719 aa14.15□□□□□ -0.14
COPB1-207ENST00000529866 TEX13AQ9BXU3 409 aaPredicted RBP14.15□□□□□ -0.14
COPB1-207ENST00000529866 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
COPB1-207ENST00000529866 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
COPB1-207ENST00000529866 MASTLQ96GX5 879 aa14.14□□□□□ -0.15
COPB1-207ENST00000529866 TAF1DQ9H5J8 278 aaPredicted RBP14.14□□□□□ -0.15
COPB1-207ENST00000529866 HMOX1P09601 288 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 IL6STP40189 918 aaPredicted RBP14.13□□□□□ -0.15
COPB1-207ENST00000529866 VEGFBP49765 207 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 EIF4G2P78344 907 aaKnown RBP eCLIP14.13□□□□□ -0.15
COPB1-207ENST00000529866 MTHFSDQ2M296 383 aaKnown RBP14.13□□□□□ -0.15
COPB1-207ENST00000529866 CCDC93Q567U6 631 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 EAPPQ56P03 285 aaPredicted RBP14.13□□□□□ -0.15
COPB1-207ENST00000529866 CCDC24Q8N4L8 307 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 WBP1LQ9NX94 342 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
COPB1-207ENST00000529866 SLC34A2O95436 690 aa14.12□□□□□ -0.15
COPB1-207ENST00000529866 SRGNP10124 158 aa14.12□□□□□ -0.15
COPB1-207ENST00000529866 TBC1D2BQ9UPU7 963 aa14.12□□□□□ -0.15
COPB1-207ENST00000529866 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
COPB1-207ENST00000529866 LBX1P52954 281 aa14.11□□□□□ -0.15
COPB1-207ENST00000529866 TEFQ10587 303 aa14.11□□□□□ -0.15
COPB1-207ENST00000529866 ZNF496Q96IT1 587 aaPredicted RBP14.11□□□□□ -0.15
COPB1-207ENST00000529866 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
COPB1-207ENST00000529866 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms