RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
TRIM3-208ENST00000529058 TTLL6Q8N841 843 aa19.56■□□□□ 0.72
TRIM3-208ENST00000529058 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
TRIM3-208ENST00000529058 NFKBIEO00221 500 aa19.55■□□□□ 0.72
TRIM3-208ENST00000529058 ZPR1O75312 459 aa19.54■□□□□ 0.72
TRIM3-208ENST00000529058 CABP4P57796 275 aa19.54■□□□□ 0.72
TRIM3-208ENST00000529058 USPL1Q5W0Q7 1092 aa19.53■□□□□ 0.72
TRIM3-208ENST00000529058 ABHD8Q96I13 439 aa19.53■□□□□ 0.72
TRIM3-208ENST00000529058 POTEIP0CG38 1075 aa19.52■□□□□ 0.72
TRIM3-208ENST00000529058 POTEJP0CG39 1038 aa19.52■□□□□ 0.72
TRIM3-208ENST00000529058 LBX1P52954 281 aa19.52■□□□□ 0.72
TRIM3-208ENST00000529058 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.71
TRIM3-208ENST00000529058 VEGFBP49765 207 aa19.51■□□□□ 0.71
TRIM3-208ENST00000529058 INTS5Q6P9B9 1019 aaKnown RBP19.51■□□□□ 0.71
TRIM3-208ENST00000529058 WBP1LQ9NX94 342 aa19.51■□□□□ 0.71
TRIM3-208ENST00000529058 NFIXQ14938 502 aa19.5■□□□□ 0.71
TRIM3-208ENST00000529058 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
TRIM3-208ENST00000529058 C2CD5Q86YS7 1000 aa19.5■□□□□ 0.71
TRIM3-208ENST00000529058 PASKQ96RG2 1323 aa19.5■□□□□ 0.71
TRIM3-208ENST00000529058 H0YIN7 160 aa19.49■□□□□ 0.71
TRIM3-208ENST00000529058 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
TRIM3-208ENST00000529058 CARD14Q9BXL6 1004 aa19.49■□□□□ 0.71
TRIM3-208ENST00000529058 SERPINB2P05120 415 aa19.48■□□□□ 0.71
TRIM3-208ENST00000529058 PLEKHO1Q53GL0 409 aaPredicted RBP19.48■□□□□ 0.71
TRIM3-208ENST00000529058 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
TRIM3-208ENST00000529058 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
TRIM3-208ENST00000529058 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
TRIM3-208ENST00000529058 MLLT1Q03111 559 aaPredicted RBP19.47■□□□□ 0.71
TRIM3-208ENST00000529058 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
TRIM3-208ENST00000529058 SCN4AP35499 1836 aa19.46■□□□□ 0.71
TRIM3-208ENST00000529058 TMEM88BA6NKF7 163 aa19.46■□□□□ 0.71
TRIM3-208ENST00000529058 DDNO94850 711 aaPredicted RBP19.46■□□□□ 0.71
TRIM3-208ENST00000529058 MTHFSP49914 203 aa19.46■□□□□ 0.71
TRIM3-208ENST00000529058 NARFQ9UHQ1 456 aa19.46■□□□□ 0.71
TRIM3-208ENST00000529058 CARMIL3Q8ND23 1372 aa19.45■□□□□ 0.7
TRIM3-208ENST00000529058 HSPA8P11142 646 aaKnown RBP19.45■□□□□ 0.7
TRIM3-208ENST00000529058 AMOTQ4VCS5 1084 aa19.45■□□□□ 0.7
TRIM3-208ENST00000529058 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
TRIM3-208ENST00000529058 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
TRIM3-208ENST00000529058 CDCA8Q53HL2 280 aa19.44■□□□□ 0.7
TRIM3-208ENST00000529058 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
TRIM3-208ENST00000529058 COL15A1P39059 1388 aa19.44■□□□□ 0.7
TRIM3-208ENST00000529058 SCN11AQ9UI33 1791 aa19.43■□□□□ 0.7
TRIM3-208ENST00000529058 IQCA1LA6NCM1 817 aa19.43■□□□□ 0.7
TRIM3-208ENST00000529058 C21orf2O43822 256 aa19.43■□□□□ 0.7
TRIM3-208ENST00000529058 RGS19P49795 217 aa19.43■□□□□ 0.7
TRIM3-208ENST00000529058 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
TRIM3-208ENST00000529058 ZNF622Q969S3 477 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM3-208ENST00000529058 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
TRIM3-208ENST00000529058 BCL2L12Q9HB09 334 aa19.42■□□□□ 0.7
TRIM3-208ENST00000529058 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
TRIM3-208ENST00000529058 LTBP3Q9NS15 1303 aa19.42■□□□□ 0.7
TRIM3-208ENST00000529058 CCDC85CA6NKD9 419 aa19.41■□□□□ 0.7
TRIM3-208ENST00000529058 ITGBL1O95965 494 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-208ENST00000529058 COL11A2P13942 1736 aaPredicted RBP19.41■□□□□ 0.7
TRIM3-208ENST00000529058 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
TRIM3-208ENST00000529058 MAP2K1Q02750 393 aaPredicted RBP19.4■□□□□ 0.7
TRIM3-208ENST00000529058 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
TRIM3-208ENST00000529058 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
TRIM3-208ENST00000529058 RASSF10A6NK89 507 aa19.39■□□□□ 0.69
TRIM3-208ENST00000529058 CYP19A1P11511 503 aaPredicted RBP19.39■□□□□ 0.69
TRIM3-208ENST00000529058 DEFB115Q30KQ5 88 aa19.39■□□□□ 0.69
TRIM3-208ENST00000529058 L3MBTL3Q96JM7 780 aaPredicted RBP19.39■□□□□ 0.69
TRIM3-208ENST00000529058 ZBTB1Q9Y2K1 713 aa19.39■□□□□ 0.69
TRIM3-208ENST00000529058 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 WDR33Q9C0J8 1336 aaKnown RBP19.37■□□□□ 0.69
TRIM3-208ENST00000529058 PDE6BP35913 854 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 BICDL1Q6ZP65 573 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
TRIM3-208ENST00000529058 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
TRIM3-208ENST00000529058 EAPPQ56P03 285 aaPredicted RBP19.36■□□□□ 0.69
TRIM3-208ENST00000529058 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
TRIM3-208ENST00000529058 THSD7BQ9C0I4 1608 aa19.33■□□□□ 0.69
TRIM3-208ENST00000529058 SOGA3Q5TF21 947 aa19.33■□□□□ 0.68
TRIM3-208ENST00000529058 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
TRIM3-208ENST00000529058 CNKSR1Q969H4 720 aa19.33■□□□□ 0.68
TRIM3-208ENST00000529058 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.68
TRIM3-208ENST00000529058 PRR5LQ6MZQ0 368 aa19.32■□□□□ 0.68
TRIM3-208ENST00000529058 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
TRIM3-208ENST00000529058 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
TRIM3-208ENST00000529058 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 CCDC24Q8N4L8 307 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
TRIM3-208ENST00000529058 ABT1Q9ULW3 272 aaKnown RBP19.31■□□□□ 0.68
TRIM3-208ENST00000529058 EPHX2P34913 555 aa19.3■□□□□ 0.68
TRIM3-208ENST00000529058 MAP1SQ66K74 1059 aaPredicted RBP19.3■□□□□ 0.68
TRIM3-208ENST00000529058 PRPF40BQ6NWY9 871 aaKnown RBP19.3■□□□□ 0.68
TRIM3-208ENST00000529058 PDE4DIPQ5VU43 2346 aa19.3■□□□□ 0.68
TRIM3-208ENST00000529058 MRC1P22897 1456 aa19.29■□□□□ 0.68
TRIM3-208ENST00000529058 A0A087WZG4 1122 aa19.29■□□□□ 0.68
TRIM3-208ENST00000529058 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
TRIM3-208ENST00000529058 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
TRIM3-208ENST00000529058 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
TRIM3-208ENST00000529058 VSIG10Q8N0Z9 540 aa19.29■□□□□ 0.68
TRIM3-208ENST00000529058 ZNF541Q9H0D2 1346 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms